Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC106858.1-201ENST00000637497 429 ntBASIC2.48□□□□□ -2.01
VSX2P58304 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
VSX2P58304 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VSX2P58304 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
VSX2P58304 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.48□□□□□ -2.01
VSX2P58304 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VSX2P58304 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
VSX2P58304 SNORA25.6-201ENST00000364121 118 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNU6-173P-201ENST00000364215 104 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNU6-343P-201ENST00000364709 104 ntBASIC2.47□□□□□ -2.01
VSX2P58304 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
VSX2P58304 Y_RNA.472-201ENST00000384322 102 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AL137014.1-201ENST00000420490 1226 ntBASIC2.47□□□□□ -2.01
VSX2P58304 MRPS36P1-201ENST00000421291 307 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.47□□□□□ -2.01
VSX2P58304 AC092573.2-201ENST00000434546 243 ntBASIC2.47□□□□□ -2.01
VSX2P58304 LSM1P1-201ENST00000438629 273 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.47□□□□□ -2.01
VSX2P58304 AC011816.1-201ENST00000441346 546 ntBASIC2.47□□□□□ -2.01
VSX2P58304 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.47□□□□□ -2.01
VSX2P58304 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.47□□□□□ -2.01
VSX2P58304 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.47□□□□□ -2.01
VSX2P58304 AC008837.2-201ENST00000513076 418 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNU4-29P-201ENST00000515943 174 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNY4P37-201ENST00000516225 96 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNA5SP282-201ENST00000516355 108 ntBASIC2.47□□□□□ -2.01
VSX2P58304 HMGB1P41-201ENST00000520234 440 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AP001804.3-201ENST00000525146 880 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.47□□□□□ -2.01
VSX2P58304 AC128657.1-201ENST00000549459 145 ntBASIC2.47□□□□□ -2.01
VSX2P58304 HIGD1AP17-201ENST00000554576 276 ntBASIC2.47□□□□□ -2.01
VSX2P58304 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.47□□□□□ -2.01
VSX2P58304 VN1R83P-201ENST00000595685 445 ntBASIC2.47□□□□□ -2.01
VSX2P58304 VN1R78P-201ENST00000597393 564 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AL356575.1-201ENST00000603008 283 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AC013444.2-201ENST00000603317 787 ntBASIC2.47□□□□□ -2.01
VSX2P58304 DUXAP11-201ENST00000603858 526 ntBASIC2.47□□□□□ -2.01
VSX2P58304 BNIP3P31-201ENST00000604515 566 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AC106791.2-201ENST00000604680 391 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AC069545.1-201ENST00000605671 358 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNU6-1192P-201ENST00000612197 107 ntBASIC2.47□□□□□ -2.01
VSX2P58304 AC024257.5-201ENST00000612739 531 ntBASIC2.47□□□□□ -2.01
VSX2P58304 MIR6817-201ENST00000615588 66 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNU6-489P-201ENST00000618289 107 ntBASIC2.47□□□□□ -2.01
VSX2P58304 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.47□□□□□ -2.01
VSX2P58304 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
VSX2P58304 CUL1P1-201ENST00000509510 2425 ntBASIC2.47□□□□□ -2.01
VSX2P58304 RNA5SP68-201ENST00000363885 119 ntBASIC2.46□□□□□ -2.02
VSX2P58304 RNU6-301P-201ENST00000384277 107 ntBASIC2.46□□□□□ -2.02
VSX2P58304 RPS4XP3-201ENST00000398541 413 ntBASIC2.46□□□□□ -2.02
VSX2P58304 VN1R51P-201ENST00000411675 945 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AL139421.1-201ENST00000423010 169 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.46□□□□□ -2.02
VSX2P58304 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.46□□□□□ -2.02
VSX2P58304 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.46□□□□□ -2.02
VSX2P58304 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.46□□□□□ -2.02
VSX2P58304 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.46□□□□□ -2.02
VSX2P58304 CACYBPP2-201ENST00000453625 678 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC234775.1-201ENST00000454247 670 ntBASIC2.46□□□□□ -2.02
VSX2P58304 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC108734.3-201ENST00000481241 1165 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.46□□□□□ -2.02
VSX2P58304 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.46□□□□□ -2.02
VSX2P58304 AC114781.4-201ENST00000513707 639 ntBASIC2.46□□□□□ -2.02
VSX2P58304 RNU6-583P-201ENST00000516012 92 ntBASIC2.46□□□□□ -2.02
VSX2P58304 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.46□□□□□ -2.02
VSX2P58304 RNU6-276P-201ENST00000516114 96 ntBASIC2.46□□□□□ -2.02
VSX2P58304 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.46□□□□□ -2.02
VSX2P58304 AC022861.1-201ENST00000522981 663 ntBASIC2.46□□□□□ -2.02
VSX2P58304 HSPA8P13-201ENST00000523715 472 ntBASIC2.46□□□□□ -2.02
VSX2P58304 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.46□□□□□ -2.02
VSX2P58304 AL355836.1-201ENST00000555951 870 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AL132657.2-201ENST00000564417 358 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC234778.2-201ENST00000566241 354 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AL390208.1-201ENST00000605885 644 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC097504.2-201ENST00000608088 454 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC243773.3-201ENST00000613270 256 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AL450472.3-201ENST00000615578 367 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC006213.4-201ENST00000616184 634 ntBASIC2.46□□□□□ -2.02
VSX2P58304 SNHG22-203ENST00000617833 660 ntBASIC2.46□□□□□ -2.02
VSX2P58304 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.46□□□□□ -2.02
VSX2P58304 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.46□□□□□ -2.02
VSX2P58304 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
VSX2P58304 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
VSX2P58304 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VSX2P58304 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
VSX2P58304 AC012321.1-201ENST00000561622 1588 ntBASIC2.45□□□□□ -2.02
VSX2P58304 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VSX2P58304 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.45□□□□□ -2.02
VSX2P58304 AL672167.1-206ENST00000356293 943 ntBASIC2.45□□□□□ -2.02
VSX2P58304 RNU4-51P-201ENST00000364206 140 ntBASIC2.45□□□□□ -2.02
VSX2P58304 RNA5SP126-201ENST00000365092 109 ntBASIC2.45□□□□□ -2.02
VSX2P58304 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VSX2P58304 RNU6-952P-201ENST00000391164 108 ntBASIC2.45□□□□□ -2.02
VSX2P58304 AL139095.1-201ENST00000404326 391 ntBASIC2.45□□□□□ -2.02
VSX2P58304 RNU2-43P-201ENST00000410306 190 ntBASIC2.45□□□□□ -2.02
VSX2P58304 MTATP6P27-201ENST00000416987 621 ntBASIC2.45□□□□□ -2.02
VSX2P58304 AL139413.1-201ENST00000421309 217 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms