Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.73□□□□□ -1.97
LIM2P55344 AP001429.1-201ENST00000602568 530 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AL031281.1-201ENST00000604049 488 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AC093732.2-201ENST00000607950 274 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AC009570.1-201ENST00000609599 745 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AL020991.1-201ENST00000612314 373 ntBASIC2.73□□□□□ -1.97
LIM2P55344 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AC079597.1-201ENST00000624306 508 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AL159972.1-201ENST00000625150 448 ntBASIC2.73□□□□□ -1.97
LIM2P55344 AC084035.1-201ENST00000634543 607 ntBASIC2.73□□□□□ -1.97
LIM2P55344 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LIM2P55344 AC008568.2-201ENST00000623862 2313 ntBASIC2.73□□□□□ -1.97
LIM2P55344 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.72□□□□□ -1.97
LIM2P55344 AL672167.1-206ENST00000356293 943 ntBASIC2.72□□□□□ -1.97
LIM2P55344 RNU1-35P-201ENST00000362782 153 ntBASIC2.72□□□□□ -1.97
LIM2P55344 RNU6-1078P-201ENST00000364522 103 ntBASIC2.72□□□□□ -1.97
LIM2P55344 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.72□□□□□ -1.97
LIM2P55344 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LIM2P55344 RNU5A-2P-201ENST00000384337 116 ntBASIC2.72□□□□□ -1.97
LIM2P55344 SNORA1.3-201ENST00000384676 136 ntBASIC2.72□□□□□ -1.97
LIM2P55344 UBA52P6-201ENST00000399822 382 ntBASIC2.72□□□□□ -1.97
LIM2P55344 MTCO1P17-201ENST00000411522 491 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.72□□□□□ -1.97
LIM2P55344 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.72□□□□□ -1.97
LIM2P55344 UBE2D3P2-201ENST00000424409 445 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AL139132.1-201ENST00000431587 344 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.72□□□□□ -1.97
LIM2P55344 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.72□□□□□ -1.97
LIM2P55344 UBE2V1P13-201ENST00000436983 439 ntBASIC2.72□□□□□ -1.97
LIM2P55344 RPL26P6-201ENST00000440913 438 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC112653.1-201ENST00000443851 386 ntBASIC2.72□□□□□ -1.97
LIM2P55344 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.72□□□□□ -1.97
LIM2P55344 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.72□□□□□ -1.97
LIM2P55344 GAPDHP27-201ENST00000447427 1020 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC106872.3-201ENST00000495104 446 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.72□□□□□ -1.97
LIM2P55344 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.72□□□□□ -1.97
LIM2P55344 HMGN1P28-201ENST00000521340 364 ntBASIC2.72□□□□□ -1.97
LIM2P55344 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.72□□□□□ -1.97
LIM2P55344 ERHP1-201ENST00000523006 310 ntBASIC2.72□□□□□ -1.97
LIM2P55344 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
LIM2P55344 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.72□□□□□ -1.97
LIM2P55344 AC021755.1-201ENST00000559747 1447 ntBASIC2.72□□□□□ -1.97
LIM2P55344 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.72□□□□□ -1.97
LIM2P55344 COX6CP3-201ENST00000580869 223 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC021171.1-201ENST00000603137 706 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC005000.2-201ENST00000605468 310 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AL158211.4-201ENST00000606988 584 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC024560.3-201ENST00000608482 349 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AL450472.3-201ENST00000615578 367 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC002076.2-201ENST00000617362 122 ntBASIC2.72□□□□□ -1.97
LIM2P55344 MIR6076-201ENST00000617521 113 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC091953.5-201ENST00000622919 233 ntBASIC2.72□□□□□ -1.97
LIM2P55344 AC092326.2-201ENST00000624772 1561 ntBASIC2.72□□□□□ -1.97
LIM2P55344 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.72□□□□□ -1.97
LIM2P55344 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LIM2P55344 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
LIM2P55344 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
LIM2P55344 AC009902.3-201ENST00000606235 2172 ntBASIC2.71□□□□□ -1.97
LIM2P55344 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.71□□□□□ -1.98
LIM2P55344 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LIM2P55344 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LIM2P55344 AL391994.1-201ENST00000254724 282 ntBASIC2.71□□□□□ -1.98
LIM2P55344 GNG5P1-201ENST00000255500 204 ntBASIC2.71□□□□□ -1.98
LIM2P55344 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LIM2P55344 RPL21P132-201ENST00000331267 462 ntBASIC2.71□□□□□ -1.98
LIM2P55344 RNU6-723P-201ENST00000383973 107 ntBASIC2.71□□□□□ -1.98
LIM2P55344 MIR483-201ENST00000385070 76 ntBASIC2.71□□□□□ -1.98
LIM2P55344 U3.20-201ENST00000390909 217 ntBASIC2.71□□□□□ -1.98
LIM2P55344 RNU6-754P-201ENST00000391166 107 ntBASIC2.71□□□□□ -1.98
LIM2P55344 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.71□□□□□ -1.98
LIM2P55344 PPP1R11P2-201ENST00000423543 382 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AL022400.1-201ENST00000423946 935 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC234781.2-201ENST00000426370 994 ntBASIC2.71□□□□□ -1.98
LIM2P55344 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.71□□□□□ -1.98
LIM2P55344 AL390023.1-201ENST00000428836 262 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AL356867.1-201ENST00000429623 299 ntBASIC2.71□□□□□ -1.98
LIM2P55344 RPS20P5-201ENST00000434808 360 ntBASIC2.71□□□□□ -1.98
LIM2P55344 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.71□□□□□ -1.98
LIM2P55344 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.71□□□□□ -1.98
LIM2P55344 RPL17P49-201ENST00000443728 411 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AL592447.1-201ENST00000447592 540 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AL109741.2-201ENST00000455561 343 ntBASIC2.71□□□□□ -1.98
LIM2P55344 RPL30P9-201ENST00000465586 330 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC080014.1-201ENST00000496877 1201 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC104685.1-201ENST00000502445 371 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.71□□□□□ -1.98
LIM2P55344 AC022690.1-201ENST00000526681 550 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AP003461.1-201ENST00000528866 78 ntBASIC2.71□□□□□ -1.98
LIM2P55344 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
LIM2P55344 OR7K1P-201ENST00000546439 926 ntBASIC2.71□□□□□ -1.98
LIM2P55344 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.71□□□□□ -1.98
LIM2P55344 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.71□□□□□ -1.98
LIM2P55344 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.71□□□□□ -1.98
LIM2P55344 AC090888.2-201ENST00000559765 1144 ntBASIC2.71□□□□□ -1.98
LIM2P55344 ISCA1P3-201ENST00000577104 373 ntBASIC2.71□□□□□ -1.98
LIM2P55344 MIR4999-201ENST00000585029 91 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.71□□□□□ -1.98
LIM2P55344 AC106900.2-201ENST00000604994 317 ntBASIC2.71□□□□□ -1.98
LIM2P55344 AC034229.4-201ENST00000607861 441 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms