Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH11P55287 AC093908.1-201ENST00000623125 8092 ntBASIC3.23□□□□□ -1.89
CDH11P55287 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH11P55287 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH11P55287 U8.3-201ENST00000363321 132 ntBASIC3.23□□□□□ -1.89
CDH11P55287 RNU6-1078P-201ENST00000364522 103 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH11P55287 RNA5SP44-201ENST00000410446 133 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH11P55287 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH11P55287 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH11P55287 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH11P55287 CRYBB2P1-203ENST00000415709 538 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC068533.1-201ENST00000418542 415 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH11P55287 AL137014.1-201ENST00000420490 1226 ntBASIC3.23□□□□□ -1.89
CDH11P55287 RPL31P12-201ENST00000422587 358 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC233728.2-201ENST00000425348 757 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH11P55287 AC079780.1-201ENST00000428259 207 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH11P55287 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH11P55287 RPL22P17-201ENST00000438729 315 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH11P55287 PRSS3P4-201ENST00000453323 162 ntBASIC3.23□□□□□ -1.89
CDH11P55287 snoU109.1-201ENST00000459339 135 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC010401.1-201ENST00000463867 348 ntBASIC3.23□□□□□ -1.89
CDH11P55287 RPL7P49-201ENST00000471402 708 ntBASIC3.23□□□□□ -1.89
CDH11P55287 RPS4XP22-201ENST00000480755 780 ntBASIC3.23□□□□□ -1.89
CDH11P55287 RPL23AP41-201ENST00000484754 458 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC114967.1-201ENST00000504890 259 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC110768.1-201ENST00000509222 400 ntBASIC3.23□□□□□ -1.89
CDH11P55287 DUXAP2-201ENST00000519198 589 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH11P55287 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.23□□□□□ -1.89
CDH11P55287 AP002453.2-201ENST00000533503 320 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC022880.1-201ENST00000534017 973 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH11P55287 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH11P55287 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH11P55287 MTND1P15-201ENST00000579262 949 ntBASIC3.23□□□□□ -1.89
CDH11P55287 CKS1BP3-201ENST00000600888 237 ntBASIC3.23□□□□□ -1.89
CDH11P55287 RNU6-87P-201ENST00000607561 108 ntBASIC3.23□□□□□ -1.89
CDH11P55287 BX664608.1-201ENST00000610519 487 ntBASIC3.23□□□□□ -1.89
CDH11P55287 TUG1_1.1-201ENST00000610654 145 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC019176.2-201ENST00000611579 315 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AL590240.3-201ENST00000621416 943 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC091953.2-201ENST00000623979 160 ntBASIC3.23□□□□□ -1.89
CDH11P55287 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH11P55287 AC138649.5-201ENST00000637456 137 ntBASIC3.23□□□□□ -1.89
CDH11P55287 AC244258.1-201ENST00000637553 1071 ntBASIC3.23□□□□□ -1.89
CDH11P55287 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH11P55287 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH11P55287 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH11P55287 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH11P55287 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
CDH11P55287 SNORA63.1-201ENST00000362493 131 ntBASIC3.22□□□□□ -1.89
CDH11P55287 SNORA7.2-201ENST00000364446 145 ntBASIC3.22□□□□□ -1.89
CDH11P55287 RNU6-882P-201ENST00000391025 103 ntBASIC3.22□□□□□ -1.89
CDH11P55287 RNU6-754P-201ENST00000391166 107 ntBASIC3.22□□□□□ -1.89
CDH11P55287 RNU2-66P-201ENST00000410650 161 ntBASIC3.22□□□□□ -1.89
CDH11P55287 ATP5A1P2-201ENST00000412323 255 ntBASIC3.22□□□□□ -1.89
CDH11P55287 RPS15AP6-201ENST00000420703 385 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 MTCO1P39-201ENST00000426148 480 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC010975.2-201ENST00000427781 588 ntBASIC3.22□□□□□ -1.89
CDH11P55287 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH11P55287 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH11P55287 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 HSPD1P21-201ENST00000436541 245 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AL138799.3-201ENST00000438968 350 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH11P55287 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 AC011825.1-201ENST00000484967 388 ntBASIC3.22□□□□□ -1.89
CDH11P55287 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH11P55287 AC109464.2-201ENST00000510242 943 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC023141.12-201ENST00000512399 199 ntBASIC3.22□□□□□ -1.89
CDH11P55287 PHBP14-201ENST00000512887 367 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC103783.1-201ENST00000520506 373 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 AP000907.2-201ENST00000530827 353 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH11P55287 MIR3913-1-201ENST00000577744 102 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH11P55287 AC068790.2-201ENST00000602601 557 ntBASIC3.22□□□□□ -1.89
CDH11P55287 NDUFA8P1-201ENST00000605525 367 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC098614.4-201ENST00000607601 462 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH11P55287 AC006566.1-201ENST00000608943 513 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC109347.2-201ENST00000610220 349 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AL589743.7-201ENST00000612637 233 ntBASIC3.22□□□□□ -1.89
CDH11P55287 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH11P55287 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC008250.2-201ENST00000615261 205 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC009268.2-201ENST00000621925 457 ntBASIC3.22□□□□□ -1.89
CDH11P55287 AC112204.3-201ENST00000623822 332 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms