Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC027290.2-201ENST00000623210 18662 ntBASIC4.16□□□□□ -1.74
TM4SF4P48230 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TM4SF4P48230 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TM4SF4P48230 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.15□□□□□ -1.74
TM4SF4P48230 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TM4SF4P48230 RNU6-301P-201ENST00000384277 107 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 RNU6-297P-201ENST00000384636 107 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TM4SF4P48230 UBE2V1P2-201ENST00000397758 440 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AL031121.1-201ENST00000406553 254 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 MTCO3P41-201ENST00000414801 328 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.15□□□□□ -1.75
TM4SF4P48230 ISCA1P6-201ENST00000427740 390 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.15□□□□□ -1.75
TM4SF4P48230 AL356867.1-201ENST00000429623 299 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 USP12PX-201ENST00000432383 1057 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.15□□□□□ -1.75
TM4SF4P48230 RPL26P6-201ENST00000440913 438 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AL136380.1-201ENST00000447970 162 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.15□□□□□ -1.75
TM4SF4P48230 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.15□□□□□ -1.75
TM4SF4P48230 HSPE1P6-201ENST00000479457 291 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AC068305.1-201ENST00000497406 726 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.15□□□□□ -1.75
TM4SF4P48230 AC017037.1-201ENST00000508460 471 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TM4SF4P48230 RNA5SP208-201ENST00000516156 78 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 SNORA70.14-201ENST00000516205 110 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 Vault.3-201ENST00000516676 95 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AC107934.1-201ENST00000522215 217 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AP003122.4-201ENST00000530980 758 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.15□□□□□ -1.75
TM4SF4P48230 MIR3118-1-201ENST00000581787 76 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AC105224.1-201ENST00000587055 421 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.15□□□□□ -1.75
TM4SF4P48230 AC245014.2-201ENST00000603689 287 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AC246785.4-201ENST00000605374 287 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AL589743.7-201ENST00000612637 233 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 AC022106.2-201ENST00000620114 757 ntBASIC4.15□□□□□ -1.75
TM4SF4P48230 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.15□□□□□ -1.75
TM4SF4P48230 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TM4SF4P48230 AL356274.2-201ENST00000624379 3752 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TM4SF4P48230 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
TM4SF4P48230 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TM4SF4P48230 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 RNU5A-6P-201ENST00000384136 116 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 RPS3AP36-201ENST00000398190 775 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 DEFB108C-201ENST00000400154 252 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.14□□□□□ -1.75
TM4SF4P48230 RNU6-248P-201ENST00000410720 107 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 BX323014.1-201ENST00000412876 237 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.14□□□□□ -1.75
TM4SF4P48230 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.14□□□□□ -1.75
TM4SF4P48230 GAPDHP17-201ENST00000449858 1001 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AL049714.1-201ENST00000466686 347 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 AC097462.2-201ENST00000504623 481 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 CDC42P4-201ENST00000510507 563 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.14□□□□□ -1.75
TM4SF4P48230 AC114797.1-201ENST00000514003 728 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.14□□□□□ -1.75
TM4SF4P48230 RNU6-405P-201ENST00000516637 110 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 RNU2-46P-201ENST00000517038 113 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 RNU6-64P-201ENST00000517119 105 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 IGKV2-26-201ENST00000518305 343 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC008011.1-201ENST00000545989 227 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC123904.3-201ENST00000547218 814 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC093012.1-202ENST00000549403 582 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.14□□□□□ -1.75
TM4SF4P48230 AC090877.1-201ENST00000561418 344 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.14□□□□□ -1.75
TM4SF4P48230 MIR4528-201ENST00000577763 90 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.14□□□□□ -1.75
TM4SF4P48230 AC090425.2-201ENST00000608818 501 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC008121.2-201ENST00000614647 523 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 SNHG22-203ENST00000617833 660 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 AC009509.4-201ENST00000619202 509 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.14□□□□□ -1.75
TM4SF4P48230 ZNF807-201ENST00000328088 1707 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
TM4SF4P48230 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 AC233263.6-201ENST00000631132 1963 ntBASIC4.14□□□□□ -1.75
TM4SF4P48230 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM4SF4P48230 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TM4SF4P48230 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
TM4SF4P48230 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF4P48230 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TM4SF4P48230 OR1S2-201ENST00000302592 978 ntBASIC4.13□□□□□ -1.75
TM4SF4P48230 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.13□□□□□ -1.75
TM4SF4P48230 RNU6-348P-201ENST00000384386 107 ntBASIC4.13□□□□□ -1.75
TM4SF4P48230 AC110754.1-201ENST00000399740 601 ntBASIC4.13□□□□□ -1.75
TM4SF4P48230 RN7SKP111-201ENST00000410349 271 ntBASIC4.13□□□□□ -1.75
TM4SF4P48230 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms