Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 U2.5-201ENST00000619465 191 ntBASIC1.42□□□□□ -2.18
SNCAP37840 U2.10-201ENST00000620268 191 ntBASIC1.42□□□□□ -2.18
SNCAP37840 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
SNCAP37840 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.42□□□□□ -2.18
SNCAP37840 BX649567.1-201ENST00000642071 1134 ntBASIC1.42□□□□□ -2.18
SNCAP37840 ZNF355P-201ENST00000427301 3216 ntBASIC1.42□□□□□ -2.18
SNCAP37840 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.41□□□□□ -2.18
SNCAP37840 AL022578.1-201ENST00000439330 1433 ntBASIC1.41□□□□□ -2.18
SNCAP37840 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SNCAP37840 U8.3-201ENST00000363321 132 ntBASIC1.41□□□□□ -2.18
SNCAP37840 RNA5SP88-201ENST00000365560 109 ntBASIC1.41□□□□□ -2.18
SNCAP37840 U8.14-201ENST00000390843 143 ntBASIC1.41□□□□□ -2.18
SNCAP37840 RSL24D1P4-201ENST00000400938 484 ntBASIC1.41□□□□□ -2.18
SNCAP37840 AGR3-202ENST00000402239 563 ntTSL 2 BASIC1.41□□□□□ -2.18
SNCAP37840 RPL7P27-201ENST00000403775 720 ntBASIC1.41□□□□□ -2.18
SNCAP37840 PTGES3P2-201ENST00000407942 482 ntBASIC1.41□□□□□ -2.18
SNCAP37840 RPS15AP38-201ENST00000413110 372 ntBASIC1.41□□□□□ -2.18
SNCAP37840 AC010881.1-201ENST00000433830 235 ntBASIC1.41□□□□□ -2.18
SNCAP37840 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.41□□□□□ -2.18
SNCAP37840 MTATP6P7-201ENST00000453315 681 ntBASIC1.41□□□□□ -2.18
SNCAP37840 CDC42P1-201ENST00000456658 548 ntBASIC1.41□□□□□ -2.18
SNCAP37840 AC104685.1-201ENST00000502445 371 ntBASIC1.41□□□□□ -2.18
SNCAP37840 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
SNCAP37840 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.41□□□□□ -2.18
SNCAP37840 AC096745.1-201ENST00000509945 370 ntBASIC1.41□□□□□ -2.18
SNCAP37840 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.41□□□□□ -2.18
SNCAP37840 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.41□□□□□ -2.18
SNCAP37840 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.41□□□□□ -2.18
SNCAP37840 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.41□□□□□ -2.18
SNCAP37840 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.41□□□□□ -2.18
SNCAP37840 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.41□□□□□ -2.18
SNCAP37840 AC135507.1-201ENST00000607214 561 ntBASIC1.41□□□□□ -2.18
SNCAP37840 AL449363.1-201ENST00000617815 186 ntBASIC1.41□□□□□ -2.18
SNCAP37840 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SNCAP37840 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.41□□□□□ -2.18
SNCAP37840 RNU6-374P-201ENST00000364146 108 ntBASIC1.4□□□□□ -2.19
SNCAP37840 RPS3AP24-201ENST00000407896 734 ntBASIC1.4□□□□□ -2.19
SNCAP37840 RNU4-78P-201ENST00000410940 126 ntBASIC1.4□□□□□ -2.19
SNCAP37840 SMC4P1-201ENST00000414479 527 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AC008173.1-201ENST00000418901 264 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.4□□□□□ -2.19
SNCAP37840 USP12PX-201ENST00000432383 1057 ntBASIC1.4□□□□□ -2.19
SNCAP37840 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
SNCAP37840 BX248409.1-201ENST00000455497 255 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AC079203.1-201ENST00000487972 404 ntBASIC1.4□□□□□ -2.19
SNCAP37840 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.4□□□□□ -2.19
SNCAP37840 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.4□□□□□ -2.19
SNCAP37840 ANXA2P1-201ENST00000505539 926 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.4□□□□□ -2.19
SNCAP37840 AC008549.1-201ENST00000512900 643 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.4□□□□□ -2.19
SNCAP37840 RNA5SP182-201ENST00000516064 82 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AP005902.1-201ENST00000521358 186 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.4□□□□□ -2.19
SNCAP37840 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.4□□□□□ -2.19
SNCAP37840 AC022880.1-201ENST00000534017 973 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.4□□□□□ -2.19
SNCAP37840 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.4□□□□□ -2.19
SNCAP37840 ATP5F1P7-201ENST00000567330 760 ntBASIC1.4□□□□□ -2.19
SNCAP37840 UBE2L4-201ENST00000587688 464 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.4□□□□□ -2.19
SNCAP37840 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
SNCAP37840 U6.48-201ENST00000618523 106 ntBASIC1.4□□□□□ -2.19
SNCAP37840 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.4□□□□□ -2.19
SNCAP37840 AL513185.3-201ENST00000433335 1300 ntBASIC1.4□□□□□ -2.19
SNCAP37840 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
SNCAP37840 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.39□□□□□ -2.19
SNCAP37840 Y_RNA.493-201ENST00000384422 102 ntBASIC1.39□□□□□ -2.19
SNCAP37840 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNCAP37840 AC098614.2-201ENST00000426040 255 ntBASIC1.39□□□□□ -2.19
SNCAP37840 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.39□□□□□ -2.19
SNCAP37840 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.39□□□□□ -2.19
SNCAP37840 TPTE2P6-202ENST00000445572 1007 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.39□□□□□ -2.19
SNCAP37840 MTCYBP17-201ENST00000503579 789 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC023141.11-201ENST00000508864 202 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC008494.2-201ENST00000514544 370 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC008562.1-201ENST00000521763 330 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.39□□□□□ -2.19
SNCAP37840 MIR4648-201ENST00000580107 72 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.39□□□□□ -2.19
SNCAP37840 AL450336.1-201ENST00000605180 586 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC103710.4-201ENST00000609301 899 ntBASIC1.39□□□□□ -2.19
SNCAP37840 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC005296.1-201ENST00000616145 209 ntBASIC1.39□□□□□ -2.19
SNCAP37840 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.39□□□□□ -2.19
SNCAP37840 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
SNCAP37840 CCT4P2-201ENST00000233836 1548 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC004520.1-201ENST00000608362 1413 ntBASIC1.39□□□□□ -2.19
SNCAP37840 AC092881.1-201ENST00000638218 2733 ntBASIC1.38□□□□□ -2.19
SNCAP37840 DDX10P1-201ENST00000448545 1933 ntBASIC1.38□□□□□ -2.19
SNCAP37840 U8.2-201ENST00000363156 134 ntBASIC1.38□□□□□ -2.19
SNCAP37840 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.38□□□□□ -2.19
SNCAP37840 AL079342.1-201ENST00000401460 267 ntBASIC1.38□□□□□ -2.19
SNCAP37840 POLHP1-201ENST00000411806 470 ntBASIC1.38□□□□□ -2.19
SNCAP37840 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.38□□□□□ -2.19
SNCAP37840 AL645568.3-201ENST00000433683 316 ntBASIC1.38□□□□□ -2.19
SNCAP37840 USP9YP15-201ENST00000442391 422 ntBASIC1.38□□□□□ -2.19
SNCAP37840 AL360221.1-201ENST00000445989 335 ntBASIC1.38□□□□□ -2.19
SNCAP37840 OR6C72P-201ENST00000451403 892 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms