Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AP000484.1-201ENST00000620067 1252 ntBASIC3.26□□□□□ -1.89
CTNNA1P35221 MTND1P37-201ENST00000636562 264 ntBASIC3.26□□□□□ -1.89
CTNNA1P35221 AP003399.1-201ENST00000637534 361 ntBASIC3.26□□□□□ -1.89
CTNNA1P35221 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.26□□□□□ -1.89
CTNNA1P35221 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.26□□□□□ -1.89
CTNNA1P35221 AC108206.1-201ENST00000570186 4159 ntBASIC3.26□□□□□ -1.89
CTNNA1P35221 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CTNNA1P35221 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CTNNA1P35221 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNA1P35221 OR1S2-201ENST00000302592 978 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CTNNA1P35221 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNA1P35221 AL357075.1-201ENST00000404107 726 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.25□□□□□ -1.89
CTNNA1P35221 OR2B8P-201ENST00000432841 938 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNA1P35221 AL117351.1-201ENST00000438864 766 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 MTCO3P45-201ENST00000443036 613 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 AC009296.1-201ENST00000443146 155 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 AL358232.1-201ENST00000448030 501 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 PDSS1P2-201ENST00000449397 678 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 DUXAP8-207ENST00000456786 622 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.25□□□□□ -1.89
CTNNA1P35221 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNA1P35221 CDC42P4-201ENST00000510507 563 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 ATP5F1P5-201ENST00000526403 760 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNA1P35221 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.25□□□□□ -1.89
CTNNA1P35221 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNA1P35221 AC010546.1-201ENST00000569391 485 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.25□□□□□ -1.89
CTNNA1P35221 AL136370.1-201ENST00000608166 691 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CTNNA1P35221 AC103798.2-201ENST00000624292 632 ntBASIC3.25□□□□□ -1.89
CTNNA1P35221 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.25□□□□□ -1.89
CTNNA1P35221 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
CTNNA1P35221 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.24□□□□□ -1.89
CTNNA1P35221 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CTNNA1P35221 SNORA62.3-201ENST00000365110 153 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CTNNA1P35221 RNU6-140P-201ENST00000384566 108 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 RN7SKP123-201ENST00000410732 291 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.24□□□□□ -1.89
CTNNA1P35221 SDR42E1P3-201ENST00000438345 502 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 FGF7P5-201ENST00000441829 291 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 WASF1P1-201ENST00000447560 1131 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 RSL24D1P3-201ENST00000449255 495 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 AC008481.1-201ENST00000463278 396 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 RPL21P10-201ENST00000463521 490 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 RN7SL293P-201ENST00000481765 281 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 RN7SL20P-201ENST00000488827 297 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 RPS15AP36-201ENST00000492022 382 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.24□□□□□ -1.89
CTNNA1P35221 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.24□□□□□ -1.89
CTNNA1P35221 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CTNNA1P35221 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.24□□□□□ -1.89
CTNNA1P35221 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.24□□□□□ -1.89
CTNNA1P35221 AC026241.1-201ENST00000517873 2142 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 AC128657.1-201ENST00000549459 145 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 AC011611.1-201ENST00000552179 197 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 AC087465.1-201ENST00000560574 245 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.24□□□□□ -1.89
CTNNA1P35221 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.24□□□□□ -1.89
CTNNA1P35221 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.24□□□□□ -1.89
CTNNA1P35221 AL355877.2-201ENST00000603670 358 ntBASIC3.24□□□□□ -1.89
CTNNA1P35221 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.23□□□□□ -1.89
CTNNA1P35221 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CTNNA1P35221 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTNNA1P35221 AC073325.2-201ENST00000339545 159 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CTNNA1P35221 SNORA7.4-201ENST00000384249 137 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 MIR134-201ENST00000385258 73 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.23□□□□□ -1.89
CTNNA1P35221 GTF2IP20-201ENST00000431663 360 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AL159987.2-201ENST00000432754 307 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 RPL23AP35-201ENST00000451906 501 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 FAM133DP-201ENST00000464802 691 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AP004217.1-201ENST00000480579 346 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 SUMO2P6-201ENST00000505273 288 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AC114786.4-201ENST00000508771 728 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AC114797.1-201ENST00000514003 728 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AC110760.3-202ENST00000515177 371 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 SUB1P1-201ENST00000524415 382 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.23□□□□□ -1.89
CTNNA1P35221 NCAPGP2-201ENST00000557911 754 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.23□□□□□ -1.89
CTNNA1P35221 PRELID3BP8-201ENST00000604148 295 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AL137843.1-201ENST00000605078 385 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AL109618.2-201ENST00000605527 211 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 AC007349.4-201ENST00000608114 532 ntBASIC3.23□□□□□ -1.89
CTNNA1P35221 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
CTNNA1P35221 AC138932.5-201ENST00000617759 563 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms