Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 DUXAP10-204ENST00000612052 616 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC002076.2-201ENST00000617362 122 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AC090772.4-201ENST00000623599 362 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 AP000676.4-201ENST00000624659 623 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 CRYM-AS1-204ENST00000637983 556 ntBASIC2.69□□□□□ -1.98
SHMT2P34897 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SHMT2P34897 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
SHMT2P34897 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.68□□□□□ -1.98
SHMT2P34897 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHMT2P34897 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SHMT2P34897 MIR493-201ENST00000385254 89 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AL138827.1-201ENST00000402666 306 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 MRPL50P2-201ENST00000416821 482 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.68□□□□□ -1.98
SHMT2P34897 MTATP6P4-201ENST00000427725 675 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC024082.2-201ENST00000434771 238 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 OR6K5P-201ENST00000447050 945 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.68□□□□□ -1.98
SHMT2P34897 AC104472.2-201ENST00000469035 601 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC003982.1-202ENST00000469928 248 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SHMT2P34897 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.68□□□□□ -1.98
SHMT2P34897 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.68□□□□□ -1.98
SHMT2P34897 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.68□□□□□ -1.98
SHMT2P34897 RNU6-150P-201ENST00000516237 95 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.68□□□□□ -1.98
SHMT2P34897 AL133271.1-201ENST00000538229 291 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.68□□□□□ -1.98
SHMT2P34897 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.68□□□□□ -1.98
SHMT2P34897 AC090695.1-201ENST00000561269 1222 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AP005205.1-201ENST00000563503 508 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC009712.1-201ENST00000564938 316 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.68□□□□□ -1.98
SHMT2P34897 AC090615.1-201ENST00000577519 154 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC022662.1-201ENST00000580252 331 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.68□□□□□ -1.98
SHMT2P34897 MIR3605-201ENST00000583214 100 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.68□□□□□ -1.98
SHMT2P34897 AC013444.2-201ENST00000603317 787 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AP000787.2-201ENST00000604432 568 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AL033523.1-201ENST00000605153 153 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC080013.3-201ENST00000606839 578 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC009974.1-201ENST00000608881 455 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC016597.2-201ENST00000613256 341 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SHMT2P34897 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.68□□□□□ -1.98
SHMT2P34897 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
SHMT2P34897 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 AC011477.1-204ENST00000623416 1325 ntBASIC2.68□□□□□ -1.98
SHMT2P34897 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC006378.2-201ENST00000623178 2476 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHMT2P34897 MIR9-1-201ENST00000385198 89 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 MIR634-201ENST00000385208 97 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AL122016.1-201ENST00000403365 367 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 RNA5SP21-201ENST00000410917 96 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 MTCYBP38-201ENST00000417160 1123 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC002381.1-201ENST00000447049 280 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 PTENP1-201ENST00000447117 1215 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 AL359385.1-201ENST00000456509 365 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC109464.2-201ENST00000510242 943 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC010587.2-201ENST00000511727 448 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 RNU6-528P-201ENST00000516926 100 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.67□□□□□ -1.98
SHMT2P34897 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.67□□□□□ -1.98
SHMT2P34897 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
SHMT2P34897 HSPE1P20-201ENST00000538133 289 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.67□□□□□ -1.98
SHMT2P34897 MTCO2P2-201ENST00000591258 225 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.67□□□□□ -1.98
SHMT2P34897 AL133507.1-201ENST00000605269 557 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC008962.1-201ENST00000605729 304 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC144521.1-201ENST00000607148 956 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC009570.1-201ENST00000609599 745 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.67□□□□□ -1.98
SHMT2P34897 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.67□□□□□ -1.98
SHMT2P34897 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.67□□□□□ -1.98
SHMT2P34897 AC090740.1-201ENST00000623193 2262 ntBASIC2.67□□□□□ -1.98
SHMT2P34897 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SHMT2P34897 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SHMT2P34897 AP000776.1-201ENST00000530032 1663 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
SHMT2P34897 AP003122.5-201ENST00000527668 3766 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.66□□□□□ -1.98
SHMT2P34897 DDX43P2-201ENST00000604753 1354 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
SHMT2P34897 SNORA5B-201ENST00000363786 132 ntBASIC2.66□□□□□ -1.98
SHMT2P34897 RPL21P75-201ENST00000396599 483 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms