Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 GAPDHP17-201ENST00000449858 1001 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 RN7SL432P-201ENST00000484057 298 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 AC069499.1-201ENST00000489433 509 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.54□□□□□ -1.84
ABCD3P28288 RNA5SP164-201ENST00000516533 110 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 RNU7-51P-201ENST00000516560 62 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 Vault.3-201ENST00000516676 95 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 RNU6-1282P-201ENST00000516735 96 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 SNORA18.6-201ENST00000516792 115 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.54□□□□□ -1.84
ABCD3P28288 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.54□□□□□ -1.84
ABCD3P28288 RPS3AP4-201ENST00000555161 764 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 HMGB1P14-201ENST00000557424 591 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 BNIP3P33-201ENST00000598912 569 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 AL138880.2-201ENST00000616214 239 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 U7.8-201ENST00000619968 63 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 AC244100.1-202ENST00000621554 382 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 AC110994.2-201ENST00000635481 492 ntBASIC3.54□□□□□ -1.84
ABCD3P28288 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
ABCD3P28288 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.54□□□□□ -1.84
ABCD3P28288 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.54□□□□□ -1.84
ABCD3P28288 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ABCD3P28288 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.53□□□□□ -1.84
ABCD3P28288 TNPO1P3-201ENST00000436471 2662 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.53□□□□□ -1.84
ABCD3P28288 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 AL049641.1-201ENST00000441055 1948 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
ABCD3P28288 Y_RNA.126-201ENST00000363382 111 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 RNU1-64P-201ENST00000365443 163 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 SNORA75-201ENST00000384158 137 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 NDUFS5P1-201ENST00000405668 289 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 AC127391.1-201ENST00000411737 98 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 AC007899.1-201ENST00000412776 775 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 CDK8P2-201ENST00000415020 547 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 Z85995.1-201ENST00000415547 335 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 C1DP2-201ENST00000418167 426 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 RPL17P36-201ENST00000420302 549 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 USP9YP36-201ENST00000424581 829 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.53□□□□□ -1.84
ABCD3P28288 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 AC092573.2-201ENST00000434546 243 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 ARPC3P1-201ENST00000437218 533 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 AC023598.1-201ENST00000472521 361 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 RAP1BP2-201ENST00000478270 544 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.53□□□□□ -1.84
ABCD3P28288 TTC39CP1-201ENST00000512513 755 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 AC022447.1-201ENST00000515358 464 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 SCARNA14-201ENST00000516903 136 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 AC022695.1-201ENST00000522089 237 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 CASP1P1-201ENST00000526345 212 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 AP002963.1-201ENST00000530590 184 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 TRAV28-201ENST00000557548 323 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.53□□□□□ -1.84
ABCD3P28288 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.53□□□□□ -1.84
ABCD3P28288 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.53□□□□□ -1.84
ABCD3P28288 AL133173.2-201ENST00000614270 90 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.53□□□□□ -1.84
ABCD3P28288 XIST_intron.1-201ENST00000619444 68 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
ABCD3P28288 U6.98-201ENST00000637157 84 ntBASIC3.53□□□□□ -1.84
ABCD3P28288 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ABCD3P28288 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.53□□□□□ -1.84
ABCD3P28288 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.53□□□□□ -1.84
ABCD3P28288 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.52□□□□□ -1.85
ABCD3P28288 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 MIR591-201ENST00000385290 95 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 RNU6-328P-201ENST00000390887 106 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 RPS3AP36-201ENST00000398190 775 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 AL445189.1-201ENST00000405722 338 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 RNU2-33P-201ENST00000410344 192 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 RNU6-1077P-201ENST00000410506 102 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 BTF3L4P1-201ENST00000413813 468 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ABCD3P28288 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.52□□□□□ -1.85
ABCD3P28288 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.52□□□□□ -1.85
ABCD3P28288 AC091390.3-201ENST00000426478 338 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.52□□□□□ -1.85
ABCD3P28288 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.52□□□□□ -1.85
ABCD3P28288 FCF1P1-201ENST00000432690 571 ntBASIC3.52□□□□□ -1.85
ABCD3P28288 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms