| MUC1 | P15941 | AC079395.3-201 | ENST00000615161 | 484 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | CLECL1-204 | ENST00000621400 | 611 nt | APPRIS ALT2 TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC011330.2-201 | ENST00000621680 | 635 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL137790.1-201 | ENST00000634283 | 177 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC006927.4-201 | ENST00000639187 | 543 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | CYLC2-201 | ENST00000374798 | 2171 nt | APPRIS P1 TSL 1 (best) BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | ZNF33BP1-201 | ENST00000452497 | 1834 nt | BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | SLC6A15-202 | ENST00000309283 | 3108 nt | TSL 5 BASIC | 2.33 | □□□□□ -2.04 | | |
| MUC1 | P15941 | FAM214A-201 | ENST00000261844 | 4217 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RAD21-210 | ENST00000523986 | 2506 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | ANKAR-209 | ENST00000520309 | 4410 nt | APPRIS P1 TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC091564.4-201 | ENST00000533934 | 2194 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC010733.2-201 | ENST00000589496 | 5702 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU6-50P-201 | ENST00000362356 | 103 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU6-1180P-201 | ENST00000364935 | 107 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | DEFB109C-201 | ENST00000382575 | 264 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | DEFB109B-201 | ENST00000382656 | 264 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | MIR9-1-201 | ENST00000385198 | 89 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU6-837P-201 | ENST00000391056 | 108 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL512633.1-201 | ENST00000399931 | 655 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL121972.1-201 | ENST00000402023 | 252 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL138880.1-201 | ENST00000405824 | 642 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU6-757P-201 | ENST00000410334 | 100 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNA5SP21-201 | ENST00000410917 | 96 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC080125.1-201 | ENST00000414888 | 684 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | COTL1P1-201 | ENST00000422309 | 375 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC00387-201 | ENST00000422609 | 458 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL109947.1-201 | ENST00000423747 | 382 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | NAALADL2-AS2-201 | ENST00000424690 | 1038 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC00407-201 | ENST00000426509 | 295 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RPS25P9-201 | ENST00000435591 | 252 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RPL23AP74-201 | ENST00000437246 | 471 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | MTND3P1-201 | ENST00000441336 | 220 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL050303.1-201 | ENST00000444356 | 458 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | OFD1P3Y-201 | ENST00000453312 | 783 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | HMGB1P22-201 | ENST00000505315 | 124 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC02201-201 | ENST00000508992 | 468 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC010587.2-201 | ENST00000511727 | 448 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC021491.3-201 | ENST00000513378 | 156 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | SNORA31.1-201 | ENST00000515993 | 133 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | SNORA31.5-201 | ENST00000516190 | 133 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNA5SP402-201 | ENST00000517148 | 110 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC109466.1-214 | ENST00000522762 | 583 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC087373.1-201 | ENST00000524920 | 491 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC023442.2-201 | ENST00000526455 | 270 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC024224.1-201 | ENST00000538284 | 609 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC00944-203 | ENST00000542248 | 548 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL355773.1-201 | ENST00000554458 | 459 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC009097.3-201 | ENST00000563557 | 1018 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | MMP2-AS1-201 | ENST00000565307 | 593 nt | TSL 4 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC087481.2-201 | ENST00000565492 | 330 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AP001021.1-201 | ENST00000577704 | 244 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC022706.1-202 | ENST00000585387 | 540 nt | TSL 3 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC012669.1-201 | ENST00000603209 | 283 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL355812.1-201 | ENST00000603215 | 216 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | DPRXP5-201 | ENST00000604662 | 539 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL158042.1-201 | ENST00000605338 | 460 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL355816.2-201 | ENST00000610049 | 647 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | DLEU2_6.1-201 | ENST00000610536 | 112 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC097478.2-201 | ENST00000610572 | 514 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC025588.4-201 | ENST00000615802 | 908 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | FP475955.2-201 | ENST00000623720 | 458 nt | TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | SEC23A-215 | ENST00000625395 | 261 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC012593.1-211 | ENST00000625996 | 799 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | FLG-AS1-207 | ENST00000628475 | 497 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | SOX2-OT-255 | ENST00000630150 | 649 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC008993.2-201 | ENST00000631744 | 806 nt | BASIC | 2.32 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AGTR1-206 | ENST00000474935 | 1795 nt | APPRIS P1 TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | SLC35A1-201 | ENST00000369552 | 1851 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | GNGT1-201 | ENST00000248572 | 720 nt | APPRIS P1 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU6-799P-201 | ENST00000363567 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU4-28P-201 | ENST00000364739 | 141 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU6-157P-201 | ENST00000383957 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL138827.1-201 | ENST00000402666 | 306 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | MIR1284-201 | ENST00000408337 | 120 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RNU2-15P-201 | ENST00000410692 | 191 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RPL22P18-201 | ENST00000417197 | 377 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC00457-201 | ENST00000428706 | 413 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | ZMYM4-AS1-201 | ENST00000432683 | 459 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC01052-201 | ENST00000437777 | 496 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC105272.1-201 | ENST00000438604 | 198 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC01307-201 | ENST00000439146 | 474 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC004485.1-201 | ENST00000439839 | 527 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC02041-201 | ENST00000440726 | 246 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | ELOCP13-201 | ENST00000443934 | 329 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AL589684.1-201 | ENST00000445974 | 507 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC121764.3-201 | ENST00000465946 | 384 nt | TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC003982.1-202 | ENST00000469928 | 248 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | RPL7P18-201 | ENST00000478965 | 734 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC090453.1-201 | ENST00000495560 | 436 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC106821.1-201 | ENST00000502861 | 572 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | PGRMC2-204 | ENST00000503872 | 1028 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | DSTNP2-201 | ENST00000504533 | 515 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC011396.1-201 | ENST00000507391 | 312 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | LINC01335-201 | ENST00000507890 | 389 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC091826.1-201 | ENST00000514065 | 313 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | IGHVII-62-1-201 | ENST00000519283 | 235 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | OR5AK1P-201 | ENST00000524837 | 922 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AP004371.1-201 | ENST00000525240 | 214 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| MUC1 | P15941 | AC087276.4-201 | ENST00000530042 | 444 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |