Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.28□□□□□ -1.88
COL2A1P02458 RNU6-506P-201ENST00000516553 94 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AP002812.4-201ENST00000532139 286 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL2A1P02458 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.28□□□□□ -1.88
COL2A1P02458 TPRKBP2-201ENST00000565969 475 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.28□□□□□ -1.88
COL2A1P02458 AL158827.2-201ENST00000602494 330 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AL035413.2-201ENST00000604801 525 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AL158211.4-201ENST00000606988 584 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AP005137.2-201ENST00000609238 400 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC025594.3-201ENST00000613068 790 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AL136981.2-201ENST00000617319 734 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC009159.1-201ENST00000618386 642 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AL691447.3-201ENST00000635020 330 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AL079343.1-201ENST00000572358 1771 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
COL2A1P02458 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.28□□□□□ -1.88
COL2A1P02458 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
COL2A1P02458 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.28□□□□□ -1.88
COL2A1P02458 OR4G2P-201ENST00000328113 903 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 MIR26A1-201ENST00000362205 77 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RNU6-500P-201ENST00000362349 107 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RNU6-543P-201ENST00000362576 108 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RNU1-35P-201ENST00000362782 153 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 SNORA72.1-201ENST00000363485 129 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RNU5F-7P-201ENST00000363696 115 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RNU6-931P-201ENST00000363850 107 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RNU6-1042P-201ENST00000384204 107 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 USP9YP6-201ENST00000413550 854 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RPL7P30-201ENST00000420888 709 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.28□□□□□ -1.88
COL2A1P02458 MTCO1P3-201ENST00000429327 192 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 ARL5AP4-201ENST00000430731 512 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 FTH1P6-201ENST00000430768 320 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 MTND1P28-201ENST00000435623 950 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AL118496.2-201ENST00000448300 230 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AP000542.1-201ENST00000448473 371 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC125238.1-201ENST00000448842 249 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 HMGB3P8-201ENST00000449709 577 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.28□□□□□ -1.88
COL2A1P02458 USP9YP34-201ENST00000453983 808 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AMD1P1-201ENST00000457220 922 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.28□□□□□ -1.88
COL2A1P02458 MTND1P16-201ENST00000465177 898 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 RPL30P9-201ENST00000465586 330 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC003982.1-202ENST00000469928 248 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC126182.1-201ENST00000478134 357 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC008628.2-201ENST00000502605 298 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC079395.1-201ENST00000510981 262 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC074344.1-201ENST00000512823 224 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.28□□□□□ -1.88
COL2A1P02458 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.28□□□□□ -1.88
COL2A1P02458 OR6C7P-201ENST00000547875 934 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.28□□□□□ -1.88
COL2A1P02458 SNORA59B-202ENST00000578183 701 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC090312.2-201ENST00000582687 378 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.28□□□□□ -1.88
COL2A1P02458 AC092354.1-201ENST00000606057 376 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC009994.1-201ENST00000606889 253 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 AC004067.1-201ENST00000608733 700 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.28□□□□□ -1.88
COL2A1P02458 MIR7153-201ENST00000637758 57 ntBASIC3.28□□□□□ -1.88
COL2A1P02458 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.89
COL2A1P02458 TAB3P1-202ENST00000452645 1634 ntBASIC3.28□□□□□ -1.89
COL2A1P02458 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.89
COL2A1P02458 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL2A1P02458 AL353743.4-201ENST00000422653 1547 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AL354685.2-201ENST00000448218 1447 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL2A1P02458 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
COL2A1P02458 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL2A1P02458 SNORA4.1-201ENST00000364263 144 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
COL2A1P02458 SNORA70E-201ENST00000384492 135 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AL139039.1-201ENST00000401900 692 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 MIR1183-201ENST00000408856 89 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 PIGPP2-201ENST00000411569 458 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.27□□□□□ -1.89
COL2A1P02458 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.27□□□□□ -1.89
COL2A1P02458 RPS15AP38-201ENST00000413110 372 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 MTND1P14-201ENST00000427400 950 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.27□□□□□ -1.89
COL2A1P02458 SEPT7P5-201ENST00000434048 306 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AL034418.1-201ENST00000448675 860 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AC090525.1-201ENST00000479116 478 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.27□□□□□ -1.89
COL2A1P02458 AC069439.1-201ENST00000494739 167 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 DYNLL1P6-201ENST00000503440 264 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 AC006445.2-201ENST00000510061 472 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 RNA5SP282-201ENST00000516355 108 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 RNU6-1153P-201ENST00000516760 105 ntBASIC3.27□□□□□ -1.89
COL2A1P02458 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.27□□□□□ -1.89
COL2A1P02458 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.27□□□□□ -1.89
COL2A1P02458 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.27□□□□□ -1.89
COL2A1P02458 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.27□□□□□ -1.89
COL2A1P02458 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.27□□□□□ -1.89
COL2A1P02458 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.27□□□□□ -1.89
COL2A1P02458 AC005730.3-201ENST00000583067 366 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms