Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SEM1P1-201ENST00000506694 209 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1AO95602 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.08□□□□□ -2.08
POLR1AO95602 AC084757.1-201ENST00000559987 490 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1AO95602 AL592494.3-201ENST00000609485 464 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
POLR1AO95602 CENPCP1-201ENST00000533085 2578 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 RNU1-101P-201ENST00000391171 127 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 MTCYBP7-201ENST00000419540 1134 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1AO95602 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.08□□□□□ -2.08
POLR1AO95602 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.08□□□□□ -2.08
POLR1AO95602 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.08□□□□□ -2.08
POLR1AO95602 AP005435.4-201ENST00000529514 284 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.08□□□□□ -2.08
POLR1AO95602 AC090897.2-201ENST00000581715 130 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 AC123786.2-201ENST00000603459 275 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.08□□□□□ -2.08
POLR1AO95602 AC083806.3-201ENST00000614016 455 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 uc_338.12-201ENST00000616344 181 ntBASIC2.08□□□□□ -2.08
POLR1AO95602 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
POLR1AO95602 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.07□□□□□ -2.08
POLR1AO95602 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.07□□□□□ -2.08
POLR1AO95602 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.07□□□□□ -2.08
POLR1AO95602 HMGB3P21-201ENST00000452483 547 ntBASIC2.07□□□□□ -2.08
POLR1AO95602 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.07□□□□□ -2.08
POLR1AO95602 OR4R1P-201ENST00000529879 463 ntBASIC2.07□□□□□ -2.08
POLR1AO95602 AC139103.1-201ENST00000534696 1030 ntBASIC2.07□□□□□ -2.08
POLR1AO95602 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.07□□□□□ -2.08
POLR1AO95602 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.07□□□□□ -2.08
POLR1AO95602 SNORD39.2-201ENST00000579995 76 ntBASIC2.07□□□□□ -2.08
POLR1AO95602 MIR5194-201ENST00000582634 120 ntBASIC2.07□□□□□ -2.08
POLR1AO95602 YWHAQP7-201ENST00000603536 658 ntBASIC2.07□□□□□ -2.08
POLR1AO95602 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
POLR1AO95602 MIR320A-201ENST00000385302 82 ntBASIC2.06□□□□□ -2.08
POLR1AO95602 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.06□□□□□ -2.08
POLR1AO95602 BZW1P2-201ENST00000473537 826 ntBASIC2.06□□□□□ -2.08
POLR1AO95602 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.06□□□□□ -2.08
POLR1AO95602 AC019176.1-201ENST00000518519 225 ntBASIC2.06□□□□□ -2.08
POLR1AO95602 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.06□□□□□ -2.08
POLR1AO95602 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.06□□□□□ -2.08
POLR1AO95602 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
POLR1AO95602 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
POLR1AO95602 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
POLR1AO95602 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.06□□□□□ -2.08
POLR1AO95602 Y_RNA.36-201ENST00000362602 112 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 SNORD56.5-201ENST00000364281 72 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 SNORA6-201ENST00000384033 151 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 RNU6-1032P-201ENST00000384100 107 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.05□□□□□ -2.08
POLR1AO95602 MTND4LP16-201ENST00000440828 295 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.05□□□□□ -2.08
POLR1AO95602 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR1AO95602 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.05□□□□□ -2.08
POLR1AO95602 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
POLR1AO95602 Z82195.2-201ENST00000612348 18351 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 MIR548J-201ENST00000408833 112 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR1AO95602 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.05□□□□□ -2.08
POLR1AO95602 HSFY3P-201ENST00000444242 1191 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 RPS23P3-201ENST00000470993 430 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 AC104685.1-201ENST00000502445 371 ntBASIC2.05□□□□□ -2.08
POLR1AO95602 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.05□□□□□ -2.08
POLR1AO95602 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
POLR1AO95602 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
POLR1AO95602 AL445183.3-201ENST00000414168 502 ntBASIC2.04□□□□□ -2.08
POLR1AO95602 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
POLR1AO95602 AL513321.1-201ENST00000441175 761 ntBASIC2.04□□□□□ -2.08
POLR1AO95602 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.04□□□□□ -2.08
POLR1AO95602 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.04□□□□□ -2.08
POLR1AO95602 AC002487.1-201ENST00000604565 994 ntBASIC2.04□□□□□ -2.08
POLR1AO95602 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.04□□□□□ -2.08
POLR1AO95602 AC095038.3-201ENST00000634439 195 ntBASIC2.04□□□□□ -2.08
POLR1AO95602 SNORA67.1-201ENST00000364749 141 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 PGBD4P3-201ENST00000440731 581 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 VN1R96P-201ENST00000446052 858 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 snoU109.4-201ENST00000458953 143 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 AC104472.2-201ENST00000469035 601 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 FO393415.2-201ENST00000480085 343 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.03□□□□□ -2.08
POLR1AO95602 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.03□□□□□ -2.08
POLR1AO95602 MIR4285-201ENST00000581001 85 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 AL391646.1-201ENST00000603860 190 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 AC010200.2-201ENST00000605098 235 ntBASIC2.03□□□□□ -2.08
POLR1AO95602 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.03□□□□□ -2.08
POLR1AO95602 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.03□□□□□ -2.08
POLR1AO95602 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
POLR1AO95602 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
POLR1AO95602 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
POLR1AO95602 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.03□□□□□ -2.09
POLR1AO95602 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.03□□□□□ -2.09
POLR1AO95602 RPS6P15-201ENST00000431996 751 ntBASIC2.03□□□□□ -2.09
POLR1AO95602 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.03□□□□□ -2.09
POLR1AO95602 AL512661.1-201ENST00000434586 1253 ntBASIC2.03□□□□□ -2.09
POLR1AO95602 HMGN2P20-201ENST00000437531 273 ntBASIC2.03□□□□□ -2.09
POLR1AO95602 Y_RNA.675-201ENST00000516389 149 ntBASIC2.03□□□□□ -2.09
POLR1AO95602 SNORA31.23-201ENST00000517219 133 ntBASIC2.03□□□□□ -2.09
POLR1AO95602 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.03□□□□□ -2.09
POLR1AO95602 AC090425.2-201ENST00000608818 501 ntBASIC2.03□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms