Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
RAPGEF3O95398 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RAPGEF3O95398 AC009902.3-201ENST00000606235 2172 ntBASIC5.15□□□□□ -1.58
RAPGEF3O95398 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC5.15□□□□□ -1.58
RAPGEF3O95398 RNA5SP197-201ENST00000363357 119 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 RNU6-1283P-201ENST00000365314 105 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 SNORD51-201ENST00000384320 80 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 Y_RNA.554-201ENST00000384672 102 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 MTCO3P40-201ENST00000392516 676 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 HLFP1-201ENST00000402375 499 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL358934.1-201ENST00000432346 324 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 MTND4LP10-201ENST00000435146 291 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL049734.2-201ENST00000441066 616 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC112653.1-201ENST00000443851 386 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 MTND4P18-201ENST00000447010 465 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL136380.1-201ENST00000447970 162 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC022795.1-201ENST00000473808 480 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC123904.2-201ENST00000548059 300 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 SNORA59B-202ENST00000578183 701 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.15□□□□□ -1.59
RAPGEF3O95398 KC877982.1-201ENST00000602313 470 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC136601.2-201ENST00000604356 474 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL162713.1-201ENST00000604480 262 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC012603.1-201ENST00000606424 528 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 OR6R2P-201ENST00000609216 300 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC128687.2-201ENST00000609657 566 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 MIR7154-201ENST00000620673 73 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL359880.1-201ENST00000621879 266 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AL157786.1-207ENST00000627771 695 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 MIR6863-201ENST00000636112 90 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC011460.1-201ENST00000636268 1834 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAPGEF3O95398 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RAPGEF3O95398 AC068254.2-201ENST00000623938 3577 ntBASIC5.15□□□□□ -1.59
RAPGEF3O95398 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAPGEF3O95398 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAPGEF3O95398 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAPGEF3O95398 Y_RNA.9-201ENST00000362354 101 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 SNORA70E-201ENST00000384492 135 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 MTND3P17-201ENST00000416968 344 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 TEX41-204ENST00000423031 491 ntTSL 4 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 DPPA2P1-201ENST00000428060 556 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 RPL32P28-201ENST00000443577 397 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC079448.1-201ENST00000449377 373 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC140076.1-201ENST00000449897 361 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AL353691.1-201ENST00000451332 387 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 MTND1P9-201ENST00000453775 944 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 snoU109.4-201ENST00000458953 143 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC109925.1-201ENST00000478069 331 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC026801.2-201ENST00000515352 425 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 RNU6-718P-201ENST00000516166 105 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 RNU6-579P-201ENST00000516879 102 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 IGKV2D-36-201ENST00000518643 226 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AP001893.2-201ENST00000526949 202 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC022882.1-201ENST00000532142 501 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC092325.1-201ENST00000566449 554 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC099489.2-201ENST00000574976 260 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 U6.42-201ENST00000618440 107 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 AL356321.1-201ENST00000621360 228 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RAPGEF3O95398 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.14□□□□□ -1.59
RAPGEF3O95398 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAPGEF3O95398 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.14□□□□□ -1.59
RAPGEF3O95398 AC004520.1-201ENST00000608362 1413 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.14□□□□□ -1.59
RAPGEF3O95398 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAPGEF3O95398 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RAPGEF3O95398 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RAPGEF3O95398 RNU6-195P-201ENST00000411352 109 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 RPS12P5-201ENST00000423449 371 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC133104.1-201ENST00000429100 218 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC000111.3-201ENST00000433478 193 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AL596276.1-201ENST00000434465 418 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.13□□□□□ -1.59
RAPGEF3O95398 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.13□□□□□ -1.59
RAPGEF3O95398 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.13□□□□□ -1.59
RAPGEF3O95398 AC104308.1-201ENST00000454621 333 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 C1DP4-201ENST00000455429 424 ntBASIC5.13□□□□□ -1.59
RAPGEF3O95398 SNORD121B-201ENST00000458838 81 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms