Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RSL24D1P2-201ENST00000445584 366 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AC104435.1-201ENST00000483483 166 ntBASIC0.65□□□□□ -2.31
USH2AO75445 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC0.65□□□□□ -2.31
USH2AO75445 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC0.65□□□□□ -2.31
USH2AO75445 MTCO3P13-201ENST00000577757 781 ntBASIC0.65□□□□□ -2.31
USH2AO75445 MAGOH2P-202ENST00000584384 429 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AC087468.1-201ENST00000604365 630 ntBASIC0.65□□□□□ -2.31
USH2AO75445 BX322635.1-201ENST00000605804 496 ntBASIC0.65□□□□□ -2.31
USH2AO75445 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
USH2AO75445 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC0.65□□□□□ -2.31
USH2AO75445 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
USH2AO75445 CYCSP33-201ENST00000414485 327 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AL158823.1-201ENST00000418441 478 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AC008837.2-201ENST00000513076 418 ntBASIC0.65□□□□□ -2.31
USH2AO75445 RNU1-92P-201ENST00000517017 135 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC0.65□□□□□ -2.31
USH2AO75445 TRAV28-201ENST00000557548 323 ntBASIC0.65□□□□□ -2.31
USH2AO75445 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.65□□□□□ -2.31
USH2AO75445 AL139286.1-201ENST00000604465 483 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AC012493.3-201ENST00000604494 112 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AC104307.1-201ENST00000616142 196 ntBASIC0.65□□□□□ -2.31
USH2AO75445 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
USH2AO75445 MIR320A-201ENST00000385302 82 ntBASIC0.64□□□□□ -2.31
USH2AO75445 MIR1197-201ENST00000408818 88 ntBASIC0.64□□□□□ -2.31
USH2AO75445 NDUFB4P5-201ENST00000415445 361 ntBASIC0.64□□□□□ -2.31
USH2AO75445 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.64□□□□□ -2.31
USH2AO75445 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.64□□□□□ -2.31
USH2AO75445 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC0.64□□□□□ -2.31
USH2AO75445 AL590095.2-201ENST00000604136 117 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AC012150.2-201ENST00000621300 544 ntBASIC0.64□□□□□ -2.31
USH2AO75445 MTND5P7-201ENST00000413558 1798 ntBASIC0.64□□□□□ -2.31
USH2AO75445 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
USH2AO75445 MTND5P27-201ENST00000428871 1720 ntBASIC0.64□□□□□ -2.31
USH2AO75445 Y_RNA.35-201ENST00000362601 101 ntBASIC0.64□□□□□ -2.31
USH2AO75445 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
USH2AO75445 AL512504.1-201ENST00000415494 778 ntBASIC0.64□□□□□ -2.31
USH2AO75445 RPL27AP8-201ENST00000424277 446 ntBASIC0.64□□□□□ -2.31
USH2AO75445 COX6CP14-201ENST00000469580 174 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AC079203.1-201ENST00000487972 404 ntBASIC0.64□□□□□ -2.31
USH2AO75445 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.64□□□□□ -2.31
USH2AO75445 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.64□□□□□ -2.31
USH2AO75445 DUXAP11-201ENST00000603858 526 ntBASIC0.64□□□□□ -2.31
USH2AO75445 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
USH2AO75445 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.64□□□□□ -2.31
USH2AO75445 AC099548.1-201ENST00000421443 426 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AC079804.2-201ENST00000490376 200 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AC084851.1-201ENST00000529105 249 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AC007687.1-201ENST00000602704 304 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC0.64□□□□□ -2.31
USH2AO75445 AC010487.4-201ENST00000637027 61 ntBASIC0.64□□□□□ -2.31
USH2AO75445 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
USH2AO75445 METTL21EP-201ENST00000298105 713 ntBASIC0.64□□□□□ -2.31
USH2AO75445 RNA5SP138-201ENST00000365098 114 ntBASIC0.64□□□□□ -2.31
USH2AO75445 MIR222-201ENST00000384992 110 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.64□□□□□ -2.31
USH2AO75445 CBX3P6-201ENST00000430257 527 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.64□□□□□ -2.31
USH2AO75445 RPL39P40-201ENST00000445481 146 ntBASIC0.64□□□□□ -2.31
USH2AO75445 MTCO3P44-201ENST00000510977 541 ntBASIC0.64□□□□□ -2.31
USH2AO75445 MIR4506-201ENST00000584693 77 ntBASIC0.64□□□□□ -2.31
USH2AO75445 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.63□□□□□ -2.31
USH2AO75445 GTF2IP7-202ENST00000436677 309 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.63□□□□□ -2.31
USH2AO75445 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
USH2AO75445 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.63□□□□□ -2.31
USH2AO75445 TBCAP3-201ENST00000512475 312 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AC087241.2-201ENST00000535801 324 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AC012557.2-201ENST00000605919 418 ntBASIC0.63□□□□□ -2.31
USH2AO75445 SNORA50A-202ENST00000629536 136 ntBASIC0.63□□□□□ -2.31
USH2AO75445 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC0.63□□□□□ -2.31
USH2AO75445 RNU1-23P-201ENST00000363361 144 ntBASIC0.63□□□□□ -2.31
USH2AO75445 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
USH2AO75445 AC244505.4-201ENST00000434905 287 ntBASIC0.63□□□□□ -2.31
USH2AO75445 SSXP5-201ENST00000443473 287 ntBASIC0.63□□□□□ -2.31
USH2AO75445 HMGN1P10-201ENST00000474557 553 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AKIRIN1P1-201ENST00000547384 544 ntBASIC0.63□□□□□ -2.31
USH2AO75445 GLUD1P4-201ENST00000590914 418 ntBASIC0.63□□□□□ -2.31
USH2AO75445 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC0.63□□□□□ -2.31
USH2AO75445 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
USH2AO75445 RNA5SP266-201ENST00000410273 108 ntBASIC0.63□□□□□ -2.31
USH2AO75445 RPL17P12-201ENST00000413391 526 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.63□□□□□ -2.31
USH2AO75445 RPL35AP22-201ENST00000436855 335 ntBASIC0.63□□□□□ -2.31
USH2AO75445 VN1R96P-201ENST00000446052 858 ntBASIC0.63□□□□□ -2.31
USH2AO75445 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.63□□□□□ -2.31
USH2AO75445 MTCYBP19-201ENST00000517463 1124 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AL049838.1-201ENST00000563647 981 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AC013553.2-201ENST00000604244 589 ntBASIC0.63□□□□□ -2.31
USH2AO75445 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
USH2AO75445 RNU6-72P-201ENST00000384285 79 ntBASIC0.63□□□□□ -2.31
USH2AO75445 Y_RNA.559-201ENST00000384686 107 ntBASIC0.63□□□□□ -2.31
USH2AO75445 SNORA26.7-201ENST00000391288 122 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AL357520.1-201ENST00000441557 453 ntBASIC0.63□□□□□ -2.31
USH2AO75445 AL391261.3-201ENST00000557194 520 ntBASIC0.63□□□□□ -2.31
USH2AO75445 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.63□□□□□ -2.31
USH2AO75445 MIR3973-201ENST00000579824 107 ntBASIC0.63□□□□□ -2.31
USH2AO75445 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC0.63□□□□□ -2.31
USH2AO75445 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC0.63□□□□□ -2.31
USH2AO75445 AC034102.8-201ENST00000615146 484 ntBASIC0.63□□□□□ -2.31
USH2AO75445 RNU6-43P-201ENST00000384302 107 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms