Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL139421.1-201ENST00000423010 169 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.87□□□□□ -1.95
MSH4O15457 AC024082.2-201ENST00000434771 238 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.87□□□□□ -1.95
MSH4O15457 ARPC3P5-201ENST00000448802 534 ntBASIC2.87□□□□□ -1.95
MSH4O15457 ZNF886P-201ENST00000450781 723 ntBASIC2.87□□□□□ -1.95
MSH4O15457 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.87□□□□□ -1.95
MSH4O15457 RNU6-711P-201ENST00000517255 106 ntBASIC2.87□□□□□ -1.95
MSH4O15457 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.87□□□□□ -1.95
MSH4O15457 AC103783.1-201ENST00000520506 373 ntBASIC2.87□□□□□ -1.95
MSH4O15457 CKS1BP7-201ENST00000522230 235 ntBASIC2.87□□□□□ -1.95
MSH4O15457 UBTFL10-201ENST00000528532 562 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AC007536.1-201ENST00000533382 349 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.87□□□□□ -1.95
MSH4O15457 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.87□□□□□ -1.95
MSH4O15457 AC027176.1-201ENST00000560204 514 ntBASIC2.87□□□□□ -1.95
MSH4O15457 OR4K7P-201ENST00000580232 945 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AL133393.1-201ENST00000603277 287 ntBASIC2.87□□□□□ -1.95
MSH4O15457 DUXAP3-201ENST00000603616 594 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AC131235.4-201ENST00000609288 620 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AC109809.1-201ENST00000619665 545 ntBASIC2.87□□□□□ -1.95
MSH4O15457 AC090740.1-201ENST00000623193 2262 ntBASIC2.87□□□□□ -1.95
MSH4O15457 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.87□□□□□ -1.95
MSH4O15457 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.87□□□□□ -1.95
MSH4O15457 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
MSH4O15457 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
MSH4O15457 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
MSH4O15457 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.86□□□□□ -1.95
MSH4O15457 AC005539.1-201ENST00000443768 1479 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AL390862.1-201ENST00000635467 1469 ntBASIC2.86□□□□□ -1.95
MSH4O15457 FRG1BP-201ENST00000278882 761 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AL672167.1-206ENST00000356293 943 ntBASIC2.86□□□□□ -1.95
MSH4O15457 MIR449A-201ENST00000362113 91 ntBASIC2.86□□□□□ -1.95
MSH4O15457 SNORD116.1-201ENST00000365628 92 ntBASIC2.86□□□□□ -1.95
MSH4O15457 SNORD21-201ENST00000383953 95 ntBASIC2.86□□□□□ -1.95
MSH4O15457 MIR518C-201ENST00000384822 101 ntBASIC2.86□□□□□ -1.95
MSH4O15457 FAT1P1-201ENST00000406588 507 ntBASIC2.86□□□□□ -1.95
MSH4O15457 RNU6-1077P-201ENST00000410506 102 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AC009963.1-201ENST00000417265 157 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.86□□□□□ -1.95
MSH4O15457 ATP5F1P1-201ENST00000433775 569 ntBASIC2.86□□□□□ -1.95
MSH4O15457 THAP5P1-201ENST00000439089 262 ntBASIC2.86□□□□□ -1.95
MSH4O15457 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.86□□□□□ -1.95
MSH4O15457 AC006483.1-201ENST00000487308 313 ntBASIC2.86□□□□□ -1.95
MSH4O15457 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.86□□□□□ -1.95
MSH4O15457 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.86□□□□□ -1.95
MSH4O15457 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.86□□□□□ -1.95
MSH4O15457 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.86□□□□□ -1.95
MSH4O15457 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.86□□□□□ -1.95
MSH4O15457 AC114781.4-201ENST00000513707 639 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AC017037.2-201ENST00000513850 890 ntBASIC2.86□□□□□ -1.95
MSH4O15457 RN7SKP24-201ENST00000515888 284 ntBASIC2.86□□□□□ -1.95
MSH4O15457 SNORA70.16-201ENST00000516390 95 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.86□□□□□ -1.95
MSH4O15457 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
MSH4O15457 AC004987.4-201ENST00000603383 338 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AP002826.1-201ENST00000608835 315 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AC069234.5-201ENST00000611056 416 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AC107075.1-201ENST00000613695 314 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AC116618.1-201ENST00000634617 774 ntBASIC2.86□□□□□ -1.95
MSH4O15457 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
MSH4O15457 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
MSH4O15457 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.86□□□□□ -1.95
MSH4O15457 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
MSH4O15457 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
MSH4O15457 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
MSH4O15457 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
MSH4O15457 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
MSH4O15457 Y_RNA.311-201ENST00000365068 96 ntBASIC2.85□□□□□ -1.95
MSH4O15457 Y_RNA.465-201ENST00000384293 102 ntBASIC2.85□□□□□ -1.95
MSH4O15457 RNU6-952P-201ENST00000391164 108 ntBASIC2.85□□□□□ -1.95
MSH4O15457 RPL23AP29-201ENST00000397284 453 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AC080125.1-201ENST00000414888 684 ntBASIC2.85□□□□□ -1.95
MSH4O15457 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.85□□□□□ -1.95
MSH4O15457 AC092648.1-201ENST00000425870 423 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.85□□□□□ -1.95
MSH4O15457 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.85□□□□□ -1.95
MSH4O15457 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.85□□□□□ -1.95
MSH4O15457 BX322784.1-201ENST00000455793 1077 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AL590639.1-201ENST00000456484 337 ntBASIC2.85□□□□□ -1.95
MSH4O15457 FAM172BP-201ENST00000487497 1089 ntBASIC2.85□□□□□ -1.95
MSH4O15457 UBE2V1P12-201ENST00000503954 474 ntBASIC2.85□□□□□ -1.95
MSH4O15457 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.85□□□□□ -1.95
MSH4O15457 AC079395.1-201ENST00000510981 262 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AC109445.1-201ENST00000512356 383 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.85□□□□□ -1.95
MSH4O15457 SNORD59.2-201ENST00000516873 68 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.85□□□□□ -1.95
MSH4O15457 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.85□□□□□ -1.95
MSH4O15457 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.85□□□□□ -1.95
MSH4O15457 BBIP1P1-201ENST00000602999 279 ntBASIC2.85□□□□□ -1.95
MSH4O15457 RNU4-5P-201ENST00000607255 135 ntBASIC2.85□□□□□ -1.95
MSH4O15457 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.85□□□□□ -1.95
MSH4O15457 AL590099.1-201ENST00000615276 138 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.85□□□□□ -1.95
MSH4O15457 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.85□□□□□ -1.95
MSH4O15457 CUL1P1-201ENST00000509510 2425 ntBASIC2.85□□□□□ -1.95
MSH4O15457 AC103988.1-201ENST00000566382 2177 ntBASIC2.85□□□□□ -1.95
MSH4O15457 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.85□□□□□ -1.95
MSH4O15457 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms