Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC092809.1-201ENST00000441469 474 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 GPM6BP1-201ENST00000446387 144 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 BTF3P5-201ENST00000457252 467 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 RPS27P23-201ENST00000487608 251 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC093278.1-201ENST00000494700 600 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 RNU6-277P-201ENST00000516272 106 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC068587.4-201ENST00000533893 186 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC020661.2-201ENST00000560114 134 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 NRBF2P1-201ENST00000587407 859 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC243960.4-201ENST00000600532 288 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC245014.2-201ENST00000603689 287 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC007621.1-201ENST00000604544 437 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC246785.4-201ENST00000605374 287 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.48□□□□□ -1.69
FOXN1O15353 AC040896.1-201ENST00000613819 479 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 AC007998.5-201ENST00000622938 237 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN1O15353 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN1O15353 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.48□□□□□ -1.69
FOXN1O15353 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
FOXN1O15353 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXN1O15353 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN1O15353 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
FOXN1O15353 MTND5P3-201ENST00000438536 1800 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 RNA5SP374-201ENST00000362939 125 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 Y_RNA.166-201ENST00000363730 102 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 RNU6-282P-201ENST00000365357 103 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 RPL7P60-201ENST00000397636 735 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN1O15353 MIR1261-201ENST00000408659 82 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 RNA5SP118-201ENST00000410385 109 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AL353678.1-201ENST00000422735 741 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AL589872.1-201ENST00000426602 288 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AL445669.1-201ENST00000426743 755 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXN1O15353 RPL23AP16-201ENST00000441715 421 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AL121877.1-201ENST00000453704 622 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 MTND1P12-201ENST00000455231 147 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AC005229.2-201ENST00000456995 399 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 MTCO1P42-201ENST00000457379 726 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 MEMO1P3-201ENST00000459811 302 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 RPL36AP51-201ENST00000487216 318 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC112204.1-201ENST00000502591 103 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN1O15353 RNU6-150P-201ENST00000516237 95 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 Y_RNA.672-201ENST00000516289 104 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 RNU6-445P-201ENST00000516949 107 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AP005597.4-201ENST00000526762 229 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.47□□□□□ -1.69
FOXN1O15353 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC007151.1-201ENST00000572774 483 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.47□□□□□ -1.69
FOXN1O15353 AP001180.3-201ENST00000582221 145 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AC010591.1-201ENST00000603941 649 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 AL732618.1-201ENST00000623251 301 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 MIR1302-1-201ENST00000637932 143 ntBASIC4.47□□□□□ -1.69
FOXN1O15353 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
FOXN1O15353 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.47□□□□□ -1.69
FOXN1O15353 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN1O15353 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
FOXN1O15353 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
FOXN1O15353 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.47□□□□□ -1.69
FOXN1O15353 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
FOXN1O15353 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
FOXN1O15353 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.46□□□□□ -1.69
FOXN1O15353 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.46□□□□□ -1.69
FOXN1O15353 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN1O15353 AL445437.1-201ENST00000623157 3087 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
FOXN1O15353 AC018529.3-201ENST00000624212 2254 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXN1O15353 SNORA63C-201ENST00000364578 129 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 Y_RNA.381-201ENST00000365666 102 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN1O15353 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXN1O15353 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXN1O15353 AC092634.6-201ENST00000418558 192 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 BX842559.1-201ENST00000419615 532 ntBASIC4.46□□□□□ -1.7
FOXN1O15353 AL589765.3-201ENST00000446084 462 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms