Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM38O00635 MLLT10P2-201ENST00000506434 249 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM38O00635 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
TRIM38O00635 AC022616.6-201ENST00000520479 119 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM38O00635 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRIM38O00635 OR5D17P-201ENST00000531492 978 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AK6P1-201ENST00000540219 478 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AC006064.5-201ENST00000541782 248 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM38O00635 AL356432.3-201ENST00000568952 465 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AC022655.2-201ENST00000577280 318 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AC005261.5-201ENST00000596280 355 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AC020914.4-201ENST00000597690 277 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AL606490.9-201ENST00000603331 271 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AL355472.4-201ENST00000610233 626 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AL713922.2-201ENST00000619384 716 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AL139089.1-201ENST00000620372 975 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AC010149.2-201ENST00000637608 315 ntBASIC4.08□□□□□ -1.76
TRIM38O00635 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM38O00635 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM38O00635 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM38O00635 RNU6-223P-201ENST00000362830 107 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 SNORA63-201ENST00000363450 132 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 RNU1-89P-201ENST00000384592 164 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 MIR19A-201ENST00000384878 82 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 MIR23A-201ENST00000385245 73 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AL136372.1-201ENST00000403060 228 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 RNU6-516P-201ENST00000411381 104 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 HMGN1P24-201ENST00000412282 298 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 USP9YP13-201ENST00000417797 480 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 BTF3L4P3-201ENST00000418879 476 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM38O00635 MTCO1P39-201ENST00000426148 480 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 RPL21P66-201ENST00000426566 466 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM38O00635 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM38O00635 AC007389.2-201ENST00000434630 306 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AL138799.3-201ENST00000438968 350 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 PGBD4P3-201ENST00000440731 581 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM38O00635 AC244505.5-201ENST00000443639 207 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 PSPHP1-201ENST00000450062 261 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM38O00635 OR5AQ1P-201ENST00000527596 927 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM38O00635 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM38O00635 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM38O00635 OR4T1P-201ENST00000554933 911 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.07□□□□□ -1.76
TRIM38O00635 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.07□□□□□ -1.76
TRIM38O00635 MIR3913-1-201ENST00000577744 102 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM38O00635 COX6CP3-201ENST00000580869 223 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC060780.3-201ENST00000589464 80 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 VN1R79P-201ENST00000593540 513 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AL022099.1-201ENST00000604551 712 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC121334.2-201ENST00000605387 271 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC012443.1-201ENST00000605605 231 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 AC006023.2-201ENST00000609916 167 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM38O00635 AL442067.2-201ENST00000614033 363 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM38O00635 Z82217.1-201ENST00000625157 8149 ntBASIC4.07□□□□□ -1.76
TRIM38O00635 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM38O00635 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM38O00635 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM38O00635 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
TRIM38O00635 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM38O00635 AC008725.1-201ENST00000605123 2263 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM38O00635 RNA5SP322-201ENST00000363617 119 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 Y_RNA.160-201ENST00000363677 92 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RNU5A-8P-201ENST00000364102 114 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RNU6-534P-201ENST00000364877 106 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM38O00635 Y_RNA.529-201ENST00000384586 119 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RNU6-332P-201ENST00000391193 108 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 CALM2P3-201ENST00000400429 449 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 FAT1P1-201ENST00000406588 507 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RNU4-65P-201ENST00000410473 140 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AL354751.2-201ENST00000415471 210 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 SSXP9-201ENST00000417503 292 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM38O00635 ELOCP14-201ENST00000428070 331 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC073464.1-201ENST00000429823 534 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC011742.1-201ENST00000431448 434 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC104850.1-201ENST00000435940 476 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RPL7P28-201ENST00000437739 740 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 FTH1P1-201ENST00000437933 532 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AF228730.2-201ENST00000438784 848 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 ELOCP7-201ENST00000439968 331 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AL356535.1-201ENST00000440335 398 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AL358232.1-201ENST00000448030 501 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 AC099563.1-201ENST00000456086 418 ntBASIC4.06□□□□□ -1.76
TRIM38O00635 RNU7-59P-201ENST00000459101 61 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms