Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-1200P-201ENST00000384162 107 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 MIR1250-201ENST00000408098 113 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL451074.5-201ENST00000415894 435 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 HIGD1AP15-201ENST00000416198 280 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 MTCO2P21-201ENST00000419780 677 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL590103.1-201ENST00000434488 307 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 MTND4LP10-201ENST00000435146 291 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 GSTA11P-201ENST00000452866 669 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 MEMO1P3-201ENST00000459811 302 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC034244.1-201ENST00000507687 207 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC006445.2-201ENST00000510061 472 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC005921.1-201ENST00000510589 286 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC114781.4-201ENST00000513707 639 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC017037.2-201ENST00000513850 890 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC022861.1-201ENST00000522981 663 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 ZNF321P-202ENST00000550843 495 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL157394.1-201ENST00000562983 1224 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL354943.1-201ENST00000572103 781 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 MTCO3P13-201ENST00000577757 781 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 MIR3690-201ENST00000580266 75 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC022022.2-201ENST00000602989 360 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL031281.1-201ENST00000604049 488 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC128687.1-201ENST00000605304 619 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC004832.5-201ENST00000608677 401 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 TUSC7.1-201ENST00000610969 165 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AP000676.3-201ENST00000623299 569 ntBASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV40A0A0B4J280 AL049780.3-201ENST00000624612 1583 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC244517.1-201ENST00000606030 2086 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 OR4G11P-202ENST00000642116 1414 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 RNA5SP167-201ENST00000365461 116 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 SNORD51-201ENST00000384320 80 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 MIR135A2-201ENST00000384854 100 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 SNORA26.7-201ENST00000391288 122 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AL512633.1-201ENST00000399931 655 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 CYCSP45-201ENST00000402289 315 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 RNA5SP129-201ENST00000410276 118 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC005005.2-201ENST00000420779 380 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC019178.2-201ENST00000423595 505 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC010099.3-201ENST00000423896 409 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AL445669.1-201ENST00000426743 755 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 DPPA2P1-201ENST00000428060 556 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 SAR1AP4-201ENST00000429225 591 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 MTND1P20-201ENST00000430341 950 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 LSM1P1-201ENST00000438629 273 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 RPS24P6-201ENST00000452670 400 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 RPL30P9-201ENST00000465586 330 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 RPL23AP11-201ENST00000475260 469 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 COX7A2P2-201ENST00000505291 250 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC096725.1-201ENST00000514266 313 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 SNORA9.3-201ENST00000516383 129 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 RNU2-58P-201ENST00000516403 183 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC234778.2-201ENST00000566241 354 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 MIR4435-1-201ENST00000582552 80 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC112220.3-201ENST00000605502 502 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC024560.3-201ENST00000608482 349 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC090115.4-201ENST00000609970 188 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AL359198.2-201ENST00000611836 194 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 Z99129.2-201ENST00000619967 314 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AL356596.1-201ENST00000624230 379 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC079228.1-201ENST00000624774 1049 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 TAB3P1-202ENST00000452645 1634 ntBASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
TRAV40A0A0B4J280 AF127577.6-201ENST00000623352 2191 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms