Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 TAF13P2-201ENST00000416876 286 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC098614.2-201ENST00000426040 255 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 Z93242.1-201ENST00000427102 353 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 RPS15AP28-201ENST00000435088 386 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC002542.1-201ENST00000440683 193 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 COX6CP12-201ENST00000446748 202 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AL500527.1-201ENST00000448532 255 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 RPS15AP27-201ENST00000449183 343 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 Z82190.1-201ENST00000454534 490 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 FAM172BP-201ENST00000487497 1089 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC118282.2-201ENST00000508739 374 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 HMGB3P3-201ENST00000510526 400 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 RNA5SP281-201ENST00000516504 135 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 SNORA31.18-201ENST00000517043 134 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AP003467.2-201ENST00000520175 319 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 MTCYBP20-201ENST00000524239 1129 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 SUB1P1-201ENST00000524415 382 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 LINC00557-201ENST00000563184 1279 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 MIR5007-201ENST00000583098 95 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 VN1R78P-201ENST00000597393 564 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AL356280.1-201ENST00000603614 379 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 AL118508.4-201ENST00000624142 1176 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 HPVC1-201ENST00000629899 1198 ntBASIC1.82□□□□□ -2.12
TRAV41A0A0B4J266 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AL139276.1-201ENST00000311910 1001 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 RNU6-839P-201ENST00000363347 108 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 RNU1-91P-201ENST00000364746 163 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 RNU4-53P-201ENST00000410828 140 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 Z75741.2-201ENST00000417272 1167 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 BOLA3P4-201ENST00000418151 400 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC092634.6-201ENST00000418558 192 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AL049714.1-201ENST00000466686 347 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 MTND4LP3-201ENST00000468320 276 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 RPL31P60-201ENST00000478450 367 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 NDUFB4P2-201ENST00000509515 391 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 RNU6-362P-201ENST00000516736 90 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 RNU6-798P-201ENST00000516912 103 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 OR4R2P-201ENST00000530815 597 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 PRELID2P1-201ENST00000552837 301 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 MIR4789-201ENST00000577469 82 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 MIR4513-201ENST00000581077 86 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 MIR4658-201ENST00000584344 65 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC005498.1-201ENST00000592125 465 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AL671309.1-201ENST00000603750 544 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AL137847.3-201ENST00000611521 109 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC011890.2-201ENST00000613393 294 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 MIR6895-201ENST00000613497 78 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 MIR8084-201ENST00000614105 89 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC097460.3-201ENST00000623099 442 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AC010149.2-201ENST00000637608 315 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 AL512283.1-201ENST00000606756 1384 ntBASIC1.81□□□□□ -2.12
TRAV41A0A0B4J266 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV41A0A0B4J266 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms