Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 UBE2V1P13-201ENST00000436983 439 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 Z82190.1-201ENST00000454534 490 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 OR52A4P-202ENST00000481634 799 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC096571.1-202ENST00000506634 735 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC006390.1-201ENST00000508068 283 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC017037.2-201ENST00000513850 890 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR514B-201ENST00000516774 80 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 ARL2BPP5-201ENST00000523141 481 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 DEFB108D-201ENST00000527787 222 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 RPS3AP23-202ENST00000574601 686 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC012493.3-201ENST00000604494 112 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC007621.1-201ENST00000604544 437 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 ATP1B3P1-201ENST00000605365 821 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC097504.2-201ENST00000608088 454 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR6852-201ENST00000621699 66 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 SGO1P1-201ENST00000603525 1447 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 AL136360.1-201ENST00000503377 1900 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 KPNA2P1-201ENST00000458289 1591 ntBASIC1.64□□□□□ -2.15
TRAV1-1A0A0B4J248 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AL137003.2-201ENST00000606924 2538 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR16-1-201ENST00000385271 89 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 UBE2V1P2-201ENST00000397758 440 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC107081.1-201ENST00000414975 361 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 NANOGP5-201ENST00000424456 877 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 ARL5AP4-201ENST00000430731 512 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC092573.2-201ENST00000434546 243 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 UBE2FP3-201ENST00000436366 524 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC007000.2-201ENST00000442564 487 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-420P-201ENST00000458780 107 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 snoU13.28-201ENST00000459235 104 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC087588.1-201ENST00000462203 316 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC104164.3-201ENST00000467363 1258 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 UBE2DNL-203ENST00000474922 222 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 RPL31P60-201ENST00000478450 367 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC011352.3-201ENST00000505162 593 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC006499.2-201ENST00000513470 337 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC119751.5-201ENST00000514077 770 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 SCARNA16.3-201ENST00000516595 184 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-798P-201ENST00000516912 103 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 HMGN1P28-201ENST00000521340 364 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC068339.2-201ENST00000534395 618 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AL138976.2-201ENST00000563989 694 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR4658-201ENST00000584344 65 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC079791.1-201ENST00000605356 973 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC104307.1-201ENST00000616142 196 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 GDI2P1-201ENST00000429312 1336 ntBASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV1-1A0A0B4J248 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC009902.3-201ENST00000606235 2172 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU1-105P-201ENST00000363470 161 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 SNORD56.4-201ENST00000363883 71 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR221-201ENST00000385135 110 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 U3.20-201ENST00000390909 217 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 HMGN2P19-201ENST00000425149 265 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC005345.1-201ENST00000431868 217 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms