Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 AC026241.1-201ENST00000517873 2142 ntBASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN10AQ9Y5Y9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 Y_RNA.466-201ENST00000384294 113 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 SNORA51.12-201ENST00000384448 134 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 RNA5SP252-201ENST00000391131 119 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 RPL19P1-201ENST00000411635 428 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 LUZP4P1-201ENST00000415420 344 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AL009174.1-201ENST00000426577 416 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AL121578.1-201ENST00000428051 892 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AC004022.1-201ENST00000447766 1066 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 SETP2-201ENST00000553886 926 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AP000787.2-201ENST00000604432 568 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 SUMO2P14-201ENST00000604488 293 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AC106791.2-201ENST00000604680 391 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 AC091953.2-201ENST00000623979 160 ntBASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SCN10AQ9Y5Y9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 RNU6-193P-201ENST00000410977 107 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 FNDC3CP-201ENST00000420795 1155 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 RPS26P21-201ENST00000475397 348 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC109486.1-201ENST00000486833 374 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 GTF2IP9-201ENST00000502460 301 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 RAC1P5-201ENST00000512182 576 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 MTND5P4-201ENST00000514978 288 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 RNU6-760P-201ENST00000516078 97 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC125611.2-201ENST00000551907 647 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC008669.1-201ENST00000565823 2178 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 AC018926.3-201ENST00000618841 406 ntBASIC2.09□□□□□ -2.08
SCN10AQ9Y5Y9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 Y_RNA.40-201ENST00000362645 93 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 MIR767-201ENST00000390228 109 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 RNU6-1197P-201ENST00000391183 107 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AC019129.1-201ENST00000403786 261 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 U3.37-201ENST00000408528 213 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 RNU4-62P-201ENST00000410125 130 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 NAP1L1P3-201ENST00000462291 880 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AC108729.3-201ENST00000513484 108 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AC011611.5-201ENST00000552477 578 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 MIR3683-201ENST00000580847 82 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AL356280.1-201ENST00000603614 379 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AC009314.1-201ENST00000603871 304 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AC083865.1-201ENST00000636634 831 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 AC005539.1-201ENST00000443768 1479 ntBASIC2.08□□□□□ -2.08
SCN10AQ9Y5Y9 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 AL513331.1-201ENST00000411908 397 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 AL133384.1-201ENST00000412744 351 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 RPL23AP58-201ENST00000440453 469 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 RNA5SP310-201ENST00000459084 116 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 RPL23AP63-201ENST00000498752 471 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 AL669831.4-202ENST00000590817 238 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 AP001330.4-201ENST00000604350 154 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 SNORA67.5-201ENST00000391036 107 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 RPL21P75-201ENST00000396599 483 ntBASIC2.07□□□□□ -2.08
SCN10AQ9Y5Y9 RPL21P28-201ENST00000401418 483 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms