Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 Z82217.1-201ENST00000625157 8149 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC092326.2-201ENST00000624772 1561 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 RNU4-1-201ENST00000363925 141 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 SNORA23-201ENST00000365128 182 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 RNU6-517P-201ENST00000384362 110 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 SOD2P1-201ENST00000396543 562 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AL138878.1-201ENST00000405131 347 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AL162389.1-201ENST00000449233 177 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 HMGB3P22-202ENST00000451823 572 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 NANOGP10-201ENST00000453325 895 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 RPL23AP31-201ENST00000456160 467 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC007537.2-201ENST00000472093 511 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC007182.2-201ENST00000489251 402 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 RN7SL323P-201ENST00000494712 295 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC091133.4-201ENST00000511142 308 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 RN7SKP13-201ENST00000515933 244 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC007991.1-201ENST00000522680 631 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC022616.3-201ENST00000523940 148 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 MIR3167-201ENST00000579623 85 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AC136475.10-201ENST00000620253 385 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 OR5H6-203ENST00000642105 978 ntBASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CLDN16Q9Y5I7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 IPO8P1-201ENST00000455509 3109 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 TAB3P1-202ENST00000452645 1634 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 RNU6-181P-201ENST00000363225 107 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 SNORD56.2-201ENST00000363242 71 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 MIR30B-201ENST00000384850 88 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 FCF1P9-201ENST00000412546 282 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 MTND3P17-201ENST00000416968 344 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC073464.1-201ENST00000429823 534 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 RPL21P11-201ENST00000461458 483 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC008481.1-201ENST00000463278 396 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC084198.1-201ENST00000477747 402 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC023194.1-201ENST00000493084 308 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC108078.1-201ENST00000508073 725 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 RAC1P2-201ENST00000511164 579 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 MIR2114-201ENST00000516645 80 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 RNU6-445P-201ENST00000516949 107 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 FAM60DP-201ENST00000524174 632 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 CYCSP30-201ENST00000546447 172 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC128657.1-201ENST00000549459 145 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC093227.2-201ENST00000589357 285 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC012443.1-201ENST00000605605 231 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AL592295.2-201ENST00000612578 206 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AL360181.4-201ENST00000621752 134 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 MIR6863-201ENST00000636112 90 ntBASIC3.6□□□□□ -1.83
CLDN16Q9Y5I7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms