Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 AC004584.2-201ENST00000570407 410 ntBASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 AC105254.2-201ENST00000603636 436 ntBASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 MTND4LP5-201ENST00000605152 292 ntBASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 AC018809.2-201ENST00000602436 3823 ntBASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 ZNF299P-201ENST00000406845 1804 ntBASIC4.93□□□□□ -1.62
FOXD3Q9UJU5 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AL121839.2-201ENST00000565058 6943 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AL034549.2-201ENST00000618285 3373 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 OR4G2P-202ENST00000641004 1759 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 Y_RNA.48-201ENST00000362710 103 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 PPIAP9-201ENST00000403866 498 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 RNU6-1025P-201ENST00000410629 104 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AL139148.1-201ENST00000427122 680 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 CYCSP6-201ENST00000434498 302 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 OR6D1P-201ENST00000436165 939 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 RNU6-1132P-201ENST00000459214 107 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 U8.21-201ENST00000459536 136 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 RN7SL727P-201ENST00000482164 296 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AL049874.1-201ENST00000489560 388 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 SNORA25.11-201ENST00000515935 105 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 HMGN2P6-201ENST00000551091 273 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 MIR3921-201ENST00000577308 85 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC078899.3-201ENST00000599065 212 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 MIR3976-201ENST00000606807 139 ntBASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
FOXD3Q9UJU5 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 RNU6-171P-201ENST00000384354 107 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AL133270.1-201ENST00000402635 279 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 RPL23AP27-201ENST00000415161 451 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 RPS3AP46-201ENST00000448352 682 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AL583843.1-201ENST00000456070 346 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 FO393415.2-201ENST00000480085 343 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AP004371.1-201ENST00000525240 214 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AC009852.2-201ENST00000567898 485 ntBASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.91□□□□□ -1.62
FOXD3Q9UJU5 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms