Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 HSPE1P7-201ENST00000604681 321 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 AC091965.4-201ENST00000607691 587 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 SDR42E1P2-201ENST00000614861 481 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 MIR6758-201ENST00000620653 63 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 MIR6733-201ENST00000635723 61 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 AC006927.3-201ENST00000638789 384 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 OR5H6-203ENST00000642105 978 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 AC092125.1-201ENST00000562568 1995 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 CCT4P2-201ENST00000233836 1548 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 AL049641.1-201ENST00000441055 1948 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 AC007785.2-201ENST00000598627 1916 ntBASIC3.23□□□□□ -1.89
CHCHD3Q9NX63 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 RNU6-500P-201ENST00000362349 107 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 RNU1-64P-201ENST00000365443 163 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL513331.1-201ENST00000411908 397 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL445669.1-201ENST00000426743 755 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 LARP1BP3-201ENST00000437229 869 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 CBWD4P-201ENST00000445695 655 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC108059.3-201ENST00000456388 214 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC023598.1-201ENST00000472521 361 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL133153.1-201ENST00000557756 303 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 PCMTD1P2-201ENST00000565017 355 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC138761.3-201ENST00000579993 334 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AL139344.1-201ENST00000605228 195 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC007038.2-201ENST00000608095 740 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC131159.1-201ENST00000621854 213 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 MIR6500-201ENST00000622700 86 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 AC127502.3-201ENST00000636170 1206 ntBASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.22□□□□□ -1.89
CHCHD3Q9NX63 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 MIR19A-201ENST00000384878 82 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 SNORA57.1-201ENST00000391227 145 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC025750.1-201ENST00000399891 379 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 Z85995.1-201ENST00000415547 335 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 Z82210.1-201ENST00000440037 231 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 MTND5P2-201ENST00000442927 1142 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 ELOCP30-201ENST00000447108 299 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC008481.1-201ENST00000463278 396 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 HSPE1P23-201ENST00000509838 286 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 NRON-201ENST00000517270 370 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC107934.2-201ENST00000518653 310 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC087373.1-201ENST00000524920 491 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 OR8R1P-201ENST00000543943 764 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 CCNG2P1-201ENST00000549521 1000 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 TRAV28-201ENST00000557548 323 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 MIR4307-201ENST00000582802 84 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AF038458.1-201ENST00000588406 262 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 GLUD1P4-201ENST00000590914 418 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 TPMTP1-201ENST00000592307 737 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 RPL23AP78-201ENST00000599928 470 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 PRELID3BP8-201ENST00000604148 295 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AL161729.4-201ENST00000604650 476 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC004223.4-201ENST00000612426 332 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC010133.1-201ENST00000615809 842 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC034229.5-201ENST00000624258 185 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 AC097655.1-201ENST00000635075 318 ntBASIC3.21□□□□□ -1.9
CHCHD3Q9NX63 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 RLIMP1-201ENST00000339626 1680 ntBASIC3.2□□□□□ -1.9
CHCHD3Q9NX63 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms