Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 RNU6-583P-201ENST00000516012 92 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 SCARNA15.2-201ENST00000516409 127 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 RNU6-467P-201ENST00000517027 110 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 OR5BN1P-201ENST00000532955 829 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AC068135.2-201ENST00000569293 1028 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AL136363.1-201ENST00000605349 337 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AL158211.4-201ENST00000606988 584 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AC009237.15-201ENST00000610252 501 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AC024257.5-201ENST00000612739 531 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AL162274.2-201ENST00000614406 332 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 AC023158.2-201ENST00000614876 543 ntBASIC2.39□□□□□ -2.03
CLN6Q9NWW5 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.39□□□□□ -2.03
CLN6Q9NWW5 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 Y_RNA.234-201ENST00000364409 97 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AL139095.1-201ENST00000404326 391 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 RNU6-193P-201ENST00000410977 107 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 RPS3AP25-201ENST00000411660 793 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 TPMTP2-201ENST00000414372 726 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 PPP1R11P2-201ENST00000423543 382 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AL512649.1-201ENST00000428997 581 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 YME1L1P1-201ENST00000429435 297 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 OR4K11P-201ENST00000431829 904 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AL714022.1-201ENST00000439897 151 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 SDAD1P2-201ENST00000441308 2028 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC009296.1-201ENST00000443146 155 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 VN1R34P-201ENST00000447387 883 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 CACYBPP2-201ENST00000453625 678 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC092155.2-201ENST00000454675 477 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 FTH1P2-201ENST00000466086 412 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC116337.2-201ENST00000477662 156 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC079203.1-201ENST00000487972 404 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 SUMO2P5-201ENST00000506790 245 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 XKRY-201ENST00000510392 1100 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 RNU6-1282P-201ENST00000516735 96 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC104072.1-201ENST00000568817 668 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC119501.1-201ENST00000603646 475 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC112220.2-201ENST00000605513 533 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 UCA1.1-201ENST00000620952 75 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AC002550.2-201ENST00000621246 394 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AL159972.1-201ENST00000625150 448 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 AL049641.1-201ENST00000441055 1948 ntBASIC2.38□□□□□ -2.03
CLN6Q9NWW5 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 SNORA71.3-201ENST00000362582 128 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 SNORA36C-201ENST00000384289 132 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 MIR34B-201ENST00000385076 84 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AL138827.1-201ENST00000402666 306 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC099548.1-201ENST00000421443 426 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC009414.1-201ENST00000427200 443 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC008850.1-201ENST00000427546 362 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 RPS29P26-201ENST00000477483 171 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 RPL23AP70-201ENST00000483361 460 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC069306.1-201ENST00000507006 843 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 OR5BM1P-201ENST00000512021 366 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AP002748.2-201ENST00000528671 348 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC012493.2-201ENST00000595083 291 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 ZNF271P-202ENST00000465539 1970 ntBASIC2.37□□□□□ -2.03
CLN6Q9NWW5 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
CLN6Q9NWW5 MTND5P1-201ENST00000445440 1375 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms