Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MTCO3P24-201ENST00000572729 782 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC011260.1-201ENST00000578420 472 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC067852.3-201ENST00000589177 561 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC112187.2-201ENST00000604345 283 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC099778.2-201ENST00000610904 211 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL603758.1-201ENST00000618654 241 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AF246928.1-201ENST00000623768 87 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC091965.5-201ENST00000624785 342 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL159972.1-201ENST00000625150 448 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC007496.3-201ENST00000624987 3443 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AC012321.1-201ENST00000561622 1588 ntBASIC3.12□□□□□ -1.91
UBQLN3Q9H347 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBQLN3Q9H347 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 MTND5P33-201ENST00000571250 1450 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC110774.1-201ENST00000623567 2018 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 RNU5F-7P-201ENST00000363696 115 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 RNA5SP267-201ENST00000364893 126 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 SNORA48.8-201ENST00000391324 134 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL356968.1-201ENST00000416622 474 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 MRPL50P2-201ENST00000416821 482 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 USP9YP26-201ENST00000421008 661 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL158156.1-201ENST00000422509 473 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 RPS27AP14-201ENST00000422868 454 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL365203.2-201ENST00000423444 196 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 TPT1P14-201ENST00000448018 505 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC097262.1-201ENST00000452559 548 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 MTND2P24-201ENST00000453434 806 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 MTCO1P42-201ENST00000457379 726 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 RPL21P8-201ENST00000465083 535 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 HSPE1P6-201ENST00000479457 291 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 RPL32P34-201ENST00000486380 400 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC005178.1-201ENST00000508392 440 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 GMPSP1-201ENST00000514075 579 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 RNU6-840P-201ENST00000517275 65 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC004024.1-201ENST00000549244 247 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 OR4T1P-201ENST00000554933 911 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 PCMTD1P2-201ENST00000565017 355 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 ZNF415P1-201ENST00000582279 1166 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 TPMTP1-201ENST00000592307 737 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC006557.5-201ENST00000603126 811 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC068313.1-201ENST00000604028 1008 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC012468.1-201ENST00000604888 430 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC006927.3-201ENST00000638789 384 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 AC008568.2-201ENST00000623862 2313 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 DDX10P1-201ENST00000448545 1933 ntBASIC3.11□□□□□ -1.91
UBQLN3Q9H347 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
UBQLN3Q9H347 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RNU6-553P-201ENST00000364047 96 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RNU6-501P-201ENST00000364072 100 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AL049545.1-201ENST00000401856 572 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RNU6-920P-201ENST00000410926 92 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RNA5SP107-201ENST00000411358 122 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 HMGN1P24-201ENST00000412282 298 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC126124.2-201ENST00000413542 321 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC107081.1-201ENST00000414975 361 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 UBE2FP1-201ENST00000416536 447 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 VPS26BP1-201ENST00000417155 755 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AC008850.1-201ENST00000427546 362 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RPL7L1P10-201ENST00000427790 463 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 AL512649.1-201ENST00000428997 581 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 RPL37P21-201ENST00000435890 276 ntBASIC3.1□□□□□ -1.91
UBQLN3Q9H347 NDUFB4P6-201ENST00000436819 366 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms