Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SNORA31.21-201ENST00000517180 77 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.79□□□□□ -1.96
NPAS2Q99743 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.79□□□□□ -1.96
NPAS2Q99743 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.79□□□□□ -1.96
NPAS2Q99743 YWHAZP1-201ENST00000556286 722 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 H3F3AP1-201ENST00000559984 334 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL132657.2-201ENST00000564417 358 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
NPAS2Q99743 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.79□□□□□ -1.96
NPAS2Q99743 AC034268.2-201ENST00000571784 482 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 MIR4298-201ENST00000584380 73 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 RPL23AP78-201ENST00000599928 470 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC015871.2-201ENST00000603605 948 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL121652.1-201ENST00000608851 448 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC090115.4-201ENST00000609970 188 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL391834.2-201ENST00000609982 546 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AC022306.3-201ENST00000619930 550 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL137790.1-201ENST00000634283 177 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 AL365361.1-201ENST00000566942 3481 ntBASIC2.79□□□□□ -1.96
NPAS2Q99743 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NPAS2Q99743 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
NPAS2Q99743 AC008669.1-201ENST00000565823 2178 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.78□□□□□ -1.96
NPAS2Q99743 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.78□□□□□ -1.96
NPAS2Q99743 Y_RNA.234-201ENST00000364409 97 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 RNU6-359P-201ENST00000365466 108 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 Y_RNA.408-201ENST00000383987 102 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
NPAS2Q99743 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NPAS2Q99743 AL139421.1-201ENST00000423010 169 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 RNU7-136P-201ENST00000458819 69 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 SNORD121B-201ENST00000458838 81 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC097493.1-201ENST00000463958 372 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 RN7SL499P-201ENST00000481141 276 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 RN7SL297P-201ENST00000483161 293 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.78□□□□□ -1.96
NPAS2Q99743 RAC1P5-201ENST00000512182 576 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 RNU6-1282P-201ENST00000516735 96 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 SNORA31.26-201ENST00000517250 137 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.78□□□□□ -1.96
NPAS2Q99743 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.78□□□□□ -1.96
NPAS2Q99743 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.78□□□□□ -1.96
NPAS2Q99743 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
NPAS2Q99743 AC020895.1-201ENST00000595362 272 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC004987.4-201ENST00000603383 338 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC068313.1-201ENST00000604028 1008 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC013553.2-201ENST00000604244 589 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC004067.1-201ENST00000608733 700 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AL138478.1-201ENST00000612252 832 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AL161629.2-201ENST00000615347 275 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC010338.1-201ENST00000621823 717 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC068880.5-201ENST00000624331 290 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC110079.1-202ENST00000635213 138 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AC013437.2-201ENST00000639587 677 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 OR5H6-203ENST00000642105 978 ntBASIC2.78□□□□□ -1.96
NPAS2Q99743 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.78□□□□□ -1.96
NPAS2Q99743 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
NPAS2Q99743 AP000526.1-201ENST00000603308 1388 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPAS2Q99743 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPAS2Q99743 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.77□□□□□ -1.97
NPAS2Q99743 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NPAS2Q99743 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
NPAS2Q99743 U8.9-201ENST00000365667 134 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 SNORA36C-201ENST00000384289 132 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 MIR514A1-201ENST00000385133 98 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 EEF1A1P41-201ENST00000414667 207 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS2Q99743 AC104332.2-201ENST00000429959 156 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC129850.1-201ENST00000436203 508 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS2Q99743 COX6CP2-201ENST00000444980 225 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
NPAS2Q99743 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.77□□□□□ -1.97
NPAS2Q99743 AL109741.2-201ENST00000455561 343 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 ARL4AP2-201ENST00000507378 601 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.77□□□□□ -1.97
NPAS2Q99743 RNU6-276P-201ENST00000516114 96 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.77□□□□□ -1.97
NPAS2Q99743 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC107016.2-201ENST00000547968 190 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC125611.2-201ENST00000551907 647 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC124947.2-202ENST00000552735 133 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 MTND3P13-201ENST00000574391 343 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.77□□□□□ -1.97
NPAS2Q99743 AL158211.4-201ENST00000606988 584 ntBASIC2.77□□□□□ -1.97
NPAS2Q99743 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.77□□□□□ -1.97
NPAS2Q99743 AL158163.2-201ENST00000619110 700 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms