Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MEIS3Q99687 MIR22-201ENST00000362190 85 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MEIS3Q99687 RNU6-1122P-201ENST00000384449 107 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 RNU6-809P-201ENST00000384461 107 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 CALM2P3-201ENST00000400429 449 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 RPL7P25-201ENST00000404151 721 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AL590002.1-201ENST00000406554 418 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.81□□□□□ -1.8
MEIS3Q99687 ZYG11AP1-201ENST00000430329 837 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.81□□□□□ -1.8
MEIS3Q99687 LSM1P1-201ENST00000438629 273 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 USP9YP12-201ENST00000450481 570 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.81□□□□□ -1.8
MEIS3Q99687 TRGVB-201ENST00000453257 471 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AL136097.1-201ENST00000456945 913 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 RPS3AP14-201ENST00000483907 780 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 LARP1BP2-201ENST00000486594 519 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC117522.1-201ENST00000509821 380 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC091133.4-201ENST00000511142 308 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 RNA5SP341-201ENST00000516261 117 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 SNORA18.6-201ENST00000516792 115 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 RNU6-430P-201ENST00000517078 107 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.81□□□□□ -1.8
MEIS3Q99687 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.81□□□□□ -1.8
MEIS3Q99687 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.81□□□□□ -1.8
MEIS3Q99687 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.81□□□□□ -1.8
MEIS3Q99687 HIGD1AP6-201ENST00000521833 279 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 PSMA2P1-201ENST00000526365 646 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC107918.3-201ENST00000533272 382 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.81□□□□□ -1.8
MEIS3Q99687 AC090312.2-201ENST00000582687 378 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC005730.3-201ENST00000583067 366 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.81□□□□□ -1.8
MEIS3Q99687 AL022154.1-201ENST00000604698 785 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC069304.2-201ENST00000605154 435 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC110741.2-201ENST00000605278 268 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC097468.3-201ENST00000607956 456 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AP001521.1-201ENST00000609150 300 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MEIS3Q99687 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.81□□□□□ -1.8
MEIS3Q99687 AC124864.2-201ENST00000624736 186 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 AL450326.2-201ENST00000421913 1962 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 PHKBP1-201ENST00000450951 1951 ntBASIC3.81□□□□□ -1.8
MEIS3Q99687 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
MEIS3Q99687 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.81□□□□□ -1.8
MEIS3Q99687 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MEIS3Q99687 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.8□□□□□ -1.8
MEIS3Q99687 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MEIS3Q99687 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MEIS3Q99687 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MEIS3Q99687 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MEIS3Q99687 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
MEIS3Q99687 RNU6-216P-201ENST00000363282 104 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 RNU6-805P-201ENST00000365643 106 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 Y_RNA.450-201ENST00000384198 113 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 Y_RNA.453-201ENST00000384223 109 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
MEIS3Q99687 AL121972.1-201ENST00000402023 252 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.8□□□□□ -1.8
MEIS3Q99687 BX295541.1-201ENST00000417774 250 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC048351.1-201ENST00000420064 602 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 MTCYBP24-201ENST00000420387 1106 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 RPS27AP14-201ENST00000422868 454 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.8□□□□□ -1.8
MEIS3Q99687 ELOCP14-201ENST00000428070 331 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC092013.1-201ENST00000438795 332 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.8□□□□□ -1.8
MEIS3Q99687 CBX1P4-201ENST00000439415 457 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 ELOCP7-201ENST00000439968 331 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.8□□□□□ -1.8
MEIS3Q99687 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.8□□□□□ -1.8
MEIS3Q99687 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.8□□□□□ -1.8
MEIS3Q99687 MTND5P20-201ENST00000448677 143 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC125238.1-201ENST00000448842 249 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AL033528.1-201ENST00000453780 140 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AMD1P1-201ENST00000457220 922 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 MEMO1P3-201ENST00000459811 302 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 RPL23AP14-201ENST00000468281 468 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC017015.1-201ENST00000477387 286 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC012170.1-201ENST00000495139 359 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC008628.2-201ENST00000502605 298 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 Y_RNA.702-201ENST00000516843 96 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 Y_RNA.704-201ENST00000516851 102 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 RN7SKP289-201ENST00000517244 295 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC009812.2-201ENST00000517657 457 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.8□□□□□ -1.8
MEIS3Q99687 AC090502.2-201ENST00000549267 280 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.8□□□□□ -1.8
MEIS3Q99687 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.8□□□□□ -1.8
MEIS3Q99687 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.8□□□□□ -1.8
MEIS3Q99687 AC093519.1-201ENST00000566109 298 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.8□□□□□ -1.8
MEIS3Q99687 BNIP3P8-201ENST00000597863 560 ntBASIC3.8□□□□□ -1.8
MEIS3Q99687 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms