Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.54□□□□□ -2
CDX2Q99626 AC244505.4-201ENST00000434905 287 ntBASIC2.54□□□□□ -2
CDX2Q99626 AC241584.1-201ENST00000438469 1241 ntBASIC2.54□□□□□ -2
CDX2Q99626 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.54□□□□□ -2
CDX2Q99626 RPL23AP16-201ENST00000441715 421 ntBASIC2.54□□□□□ -2
CDX2Q99626 SSXP5-201ENST00000443473 287 ntBASIC2.54□□□□□ -2
CDX2Q99626 AL592437.1-201ENST00000443781 492 ntBASIC2.54□□□□□ -2
CDX2Q99626 COX6CP18-201ENST00000448769 222 ntBASIC2.54□□□□□ -2
CDX2Q99626 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.54□□□□□ -2
CDX2Q99626 AC244505.3-201ENST00000454598 187 ntBASIC2.54□□□□□ -2
CDX2Q99626 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDX2Q99626 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.54□□□□□ -2
CDX2Q99626 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.54□□□□□ -2
CDX2Q99626 AC092451.2-201ENST00000538746 658 ntBASIC2.54□□□□□ -2
CDX2Q99626 AC087481.2-201ENST00000565492 330 ntBASIC2.54□□□□□ -2
CDX2Q99626 AC023825.1-201ENST00000566704 1030 ntBASIC2.54□□□□□ -2
CDX2Q99626 AC012182.1-201ENST00000570133 895 ntBASIC2.54□□□□□ -2
CDX2Q99626 AP000238.1-201ENST00000608759 426 ntBASIC2.54□□□□□ -2
CDX2Q99626 AP000943.4-201ENST00000622912 357 ntBASIC2.54□□□□□ -2
CDX2Q99626 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.54□□□□□ -2
CDX2Q99626 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.54□□□□□ -2
CDX2Q99626 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.54□□□□□ -2
CDX2Q99626 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CDX2Q99626 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.54□□□□□ -2
CDX2Q99626 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDX2Q99626 RNU6-236P-201ENST00000363886 106 ntBASIC2.53□□□□□ -2
CDX2Q99626 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDX2Q99626 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
CDX2Q99626 SNORA51.6-201ENST00000384151 125 ntBASIC2.53□□□□□ -2
CDX2Q99626 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDX2Q99626 AL512633.1-201ENST00000399931 655 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC013410.2-201ENST00000422627 201 ntBASIC2.53□□□□□ -2
CDX2Q99626 AL035410.1-201ENST00000427409 427 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.53□□□□□ -2
CDX2Q99626 YWHAZP7-201ENST00000436906 631 ntBASIC2.53□□□□□ -2
CDX2Q99626 RPL21P2-201ENST00000440049 481 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.53□□□□□ -2
CDX2Q99626 AC010285.1-201ENST00000470580 392 ntBASIC2.53□□□□□ -2
CDX2Q99626 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDX2Q99626 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDX2Q99626 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
CDX2Q99626 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.53□□□□□ -2
CDX2Q99626 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.53□□□□□ -2
CDX2Q99626 AC068339.2-201ENST00000534395 618 ntBASIC2.53□□□□□ -2
CDX2Q99626 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.53□□□□□ -2
CDX2Q99626 AC126177.3-201ENST00000551839 688 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
CDX2Q99626 VN1R87P-201ENST00000596706 487 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.53□□□□□ -2
CDX2Q99626 XIAPP1-201ENST00000603162 600 ntBASIC2.53□□□□□ -2
CDX2Q99626 AL355812.1-201ENST00000603215 216 ntBASIC2.53□□□□□ -2
CDX2Q99626 MTATP6P2-201ENST00000603319 678 ntBASIC2.53□□□□□ -2
CDX2Q99626 AL133445.2-201ENST00000611191 527 ntBASIC2.53□□□□□ -2
CDX2Q99626 AL110115.1-201ENST00000614396 364 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC008083.4-201ENST00000615076 444 ntBASIC2.53□□□□□ -2
CDX2Q99626 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.53□□□□□ -2
CDX2Q99626 AL109620.1-201ENST00000618738 1197 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC007275.1-201ENST00000621243 671 ntBASIC2.53□□□□□ -2
CDX2Q99626 MTND2P41-201ENST00000637599 773 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC006927.2-201ENST00000639256 389 ntBASIC2.53□□□□□ -2
CDX2Q99626 WWP1P1-201ENST00000466609 2769 ntBASIC2.53□□□□□ -2
CDX2Q99626 AC008264.2-201ENST00000610193 3731 ntBASIC2.53□□□□□ -2.01
CDX2Q99626 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDX2Q99626 RPL9P7-201ENST00000330965 580 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 SUGT1P1-201ENST00000379514 476 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AL035405.1-201ENST00000400795 710 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AL023807.1-201ENST00000407932 359 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 RNU4-78P-201ENST00000410940 126 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AL136133.1-201ENST00000413694 376 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AC080125.1-201ENST00000414888 684 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 RAD23BP2-201ENST00000416003 1207 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 ATG3P1-201ENST00000419507 911 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX2Q99626 AC109583.1-201ENST00000432156 268 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CDX2Q99626 AP000949.1-201ENST00000438328 629 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX2Q99626 NDUFA5P7-201ENST00000452914 242 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 MRPL42P4-201ENST00000453267 443 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX2Q99626 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.52□□□□□ -2.01
CDX2Q99626 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.52□□□□□ -2.01
CDX2Q99626 AC084024.2-201ENST00000503480 791 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 NAMPTP2-201ENST00000505629 1115 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
CDX2Q99626 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX2Q99626 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX2Q99626 SNORA9.3-201ENST00000516383 129 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 GNAI2P1-201ENST00000541815 315 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 LSM6P2-201ENST00000552208 177 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AC093519.1-201ENST00000566109 298 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.52□□□□□ -2.01
CDX2Q99626 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.52□□□□□ -2.01
CDX2Q99626 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.52□□□□□ -2.01
CDX2Q99626 AL022099.1-201ENST00000604551 712 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AC103710.2-201ENST00000609912 942 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 VIS1.1-201ENST00000610517 203 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 VN1R74P-201ENST00000613259 503 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 AC010975.3-201ENST00000618727 978 ntBASIC2.52□□□□□ -2.01
CDX2Q99626 Z99129.2-201ENST00000619967 314 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms