Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 RNU6-339P-201ENST00000384310 107 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 Y_RNA.474-201ENST00000384341 102 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 Y_RNA.615-201ENST00000410769 117 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 RNA5SP104-201ENST00000410989 118 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 OR2AS1P-201ENST00000427827 319 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 MTND6P18-201ENST00000439477 513 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AL591623.2-201ENST00000449978 222 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 RNU6-329P-201ENST00000459618 107 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 RN7SL132P-201ENST00000478131 296 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AF213884.1-201ENST00000488102 463 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC068305.1-201ENST00000497406 726 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC017037.1-201ENST00000508460 471 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC005798.1-201ENST00000513715 387 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 SNORA19.2-201ENST00000516013 114 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC011979.2-201ENST00000527568 352 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 CYCSP29-201ENST00000533731 318 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC128657.1-201ENST00000549459 145 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 SETP7-201ENST00000552169 453 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 MIR4742-201ENST00000581069 85 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 AC243960.4-201ENST00000600532 288 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 uc_338.5-201ENST00000611839 155 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 MIR1302-1-201ENST00000637932 143 ntBASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CHAMP1Q96JM3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CHAMP1Q96JM3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.84□□□□□ -1.64
CHAMP1Q96JM3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CHAMP1Q96JM3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 MAPK10-286ENST00000641208 8747 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 OR5P1P-201ENST00000299512 925 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 Y_RNA.231-201ENST00000364358 102 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 SNORA32.2-201ENST00000384049 122 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 MIR483-201ENST00000385070 76 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 RNU6-903P-201ENST00000391270 109 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 MIR1302-11-201ENST00000408051 138 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 MIR1302-9-201ENST00000408365 138 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 MIR1302-10-201ENST00000408734 138 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 HMGN1P24-201ENST00000412282 298 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC018630.2-202ENST00000422992 927 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC011742.1-201ENST00000431448 434 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 RNU7-59P-201ENST00000459101 61 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 RPL37P6-202ENST00000464216 403 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC026427.2-201ENST00000506228 536 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC092436.1-201ENST00000506450 503 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 Y_RNA.691-201ENST00000516611 103 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 RNU1-45P-201ENST00000517191 141 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 NARSP2-201ENST00000518524 679 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 BNIP3P6-201ENST00000549284 499 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AL442663.2-201ENST00000554385 511 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 MIR4512-201ENST00000583257 77 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AL451044.1-201ENST00000604867 238 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 MIR1302-2-201ENST00000607096 138 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC004908.2-201ENST00000609090 574 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC079684.1-201ENST00000621405 437 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC244100.1-202ENST00000621554 382 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 RMST_7.1-201ENST00000621935 268 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC091953.5-201ENST00000622919 233 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AL773545.4-201ENST00000637262 310 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AL513478.4-201ENST00000641636 310 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC125257.1-201ENST00000560400 2930 ntBASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.83□□□□□ -1.64
CHAMP1Q96JM3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CHAMP1Q96JM3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms