Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.28□□□□□ -2.2
SPG11Q96JI7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SPG11Q96JI7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.2
SPG11Q96JI7 AC105245.1-201ENST00000581934 244 ntBASIC1.28□□□□□ -2.2
SPG11Q96JI7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.28□□□□□ -2.2
SPG11Q96JI7 SEPT7P9-203ENST00000604116 343 ntBASIC1.28□□□□□ -2.2
SPG11Q96JI7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SPG11Q96JI7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC084851.1-201ENST00000529105 249 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC024614.2-201ENST00000577584 372 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC005034.5-201ENST00000604219 466 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC112191.3-201ENST00000604371 277 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC083806.3-201ENST00000614016 455 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
SPG11Q96JI7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AL030996.1-201ENST00000411430 235 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 RPL27AP8-201ENST00000424277 446 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AL078601.1-201ENST00000444542 271 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 SNX5P1-201ENST00000505757 1041 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC084364.2-201ENST00000546924 395 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 PRELID2P1-201ENST00000552837 301 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 MIR6078-201ENST00000611069 100 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 AL121594.5-201ENST00000631724 573 ntBASIC1.27□□□□□ -2.21
SPG11Q96JI7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.27□□□□□ -2.21
SPG11Q96JI7 AC019155.1-201ENST00000382242 574 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 Y_RNA.549-201ENST00000384657 102 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 AP000873.1-201ENST00000463987 400 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 GOLGA5P1-201ENST00000507317 980 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 NDUFB4P9-201ENST00000511646 388 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 EEF1B2P4-201ENST00000551398 348 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 DBF4P1-201ENST00000412976 1892 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 AC073264.1-201ENST00000411508 416 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 HMGN1P14-201ENST00000412459 517 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 AC009965.2-201ENST00000425328 970 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 HMGB1P45-201ENST00000435986 653 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 AC092989.1-201ENST00000481235 277 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 MTCYBP18-201ENST00000501056 747 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 SUMO2P4-201ENST00000504193 276 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SPG11Q96JI7 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 AC048347.1-201ENST00000624621 427 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.26□□□□□ -2.21
SPG11Q96JI7 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.26□□□□□ -2.21
SPG11Q96JI7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SPG11Q96JI7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 RSL24D1P2-201ENST00000445584 366 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 RNA5SP436-201ENST00000516020 115 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 AC090525.3-201ENST00000605601 189 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
SPG11Q96JI7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 AC093084.1-201ENST00000424233 687 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 MTCYBP12-201ENST00000440559 1134 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.25□□□□□ -2.21
SPG11Q96JI7 AL109653.1-201ENST00000603091 248 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 AC013553.2-201ENST00000604244 589 ntBASIC1.25□□□□□ -2.21
SPG11Q96JI7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 SNORA16.1-201ENST00000364597 132 ntBASIC1.24□□□□□ -2.21
SPG11Q96JI7 SNORA79B-201ENST00000410557 148 ntBASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC073901.1-201ENST00000462471 408 ntBASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC012493.3-201ENST00000604494 112 ntBASIC1.24□□□□□ -2.21
SPG11Q96JI7 RPS12P24-201ENST00000412619 387 ntBASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC018630.2-202ENST00000422992 927 ntBASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC022447.3-201ENST00000506865 495 ntBASIC1.24□□□□□ -2.21
SPG11Q96JI7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.24□□□□□ -2.21
SPG11Q96JI7 AL355596.1-201ENST00000565399 3996 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC012321.1-201ENST00000561622 1588 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SPG11Q96JI7 RNA5SP27-201ENST00000363839 119 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms