Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 HMGN2P16-201ENST00000456802 261 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC091180.1-201ENST00000462104 372 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 RPL23AP65-201ENST00000475608 468 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 RNU6-566P-201ENST00000516790 107 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 RNU6-273P-201ENST00000516937 96 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC087369.1-201ENST00000520775 996 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 MIR4502-201ENST00000580432 81 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC023043.2-201ENST00000589678 1026 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC136601.2-201ENST00000604356 474 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 MIR6806-201ENST00000622141 64 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AL031601.2-202ENST00000622650 282 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AL133216.2-202ENST00000634512 349 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 5S_rRNA.29-201ENST00000641250 107 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 AC118273.1-201ENST00000525324 3006 ntBASIC4□□□□□ -1.77
CLRN3Q8NCR9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN3Q8NCR9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CLRN3Q8NCR9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CLRN3Q8NCR9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 RNU4-79P-201ENST00000362764 141 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.474-201ENST00000384341 102 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 YPEL5P1-201ENST00000419731 367 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 COX6CP13-201ENST00000428703 226 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 SNAP23P1-201ENST00000433229 246 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC005019.1-201ENST00000436455 431 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 PSMD10P3-201ENST00000437000 448 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 CECR9-201ENST00000453421 199 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.635-201ENST00000459041 101 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 RN7SL741P-201ENST00000482473 289 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC022493.1-201ENST00000492984 337 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC092349.1-201ENST00000504903 310 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 MTND3P25-201ENST00000509243 135 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.682-201ENST00000516457 100 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 RNU6-323P-201ENST00000521915 107 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 IGLV3-30-201ENST00000524362 298 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AP000620.1-201ENST00000527147 504 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AP006289.1-201ENST00000538089 277 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC093027.1-201ENST00000546698 429 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 MIR4701-201ENST00000583094 63 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 MIR3672-201ENST00000584290 82 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC020910.3-201ENST00000603701 874 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC000068.2-201ENST00000608816 460 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC103858.2-201ENST00000621471 543 ntBASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.99□□□□□ -1.77
CLRN3Q8NCR9 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC005183.1-201ENST00000603687 1979 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RNA5SP232-201ENST00000364144 119 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 Y_RNA.387-201ENST00000383918 102 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AL445189.1-201ENST00000405722 338 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 U3.35-201ENST00000408405 208 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC074085.1-201ENST00000413598 418 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AL035422.1-201ENST00000414193 397 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 SNRPEP9-201ENST00000436794 238 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AL391987.1-201ENST00000441025 200 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 GEMIN2P1-201ENST00000454246 752 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC117503.1-201ENST00000472241 394 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC098847.1-201ENST00000473094 348 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RPL7P43-201ENST00000478876 753 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 RPL21P13-201ENST00000488305 481 ntBASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC3.98□□□□□ -1.77
CLRN3Q8NCR9 AC018797.1-201ENST00000510791 255 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms