Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 AC243312.2-201ENST00000623340 601 ntBASIC3.2□□□□□ -1.9
CCDC63Q8NA47 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.2□□□□□ -1.9
CCDC63Q8NA47 AC006927.3-201ENST00000638789 384 ntBASIC3.2□□□□□ -1.9
CCDC63Q8NA47 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CCDC63Q8NA47 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CCDC63Q8NA47 AL513185.3-201ENST00000433335 1300 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 MAPK10-322ENST00000641485 4530 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 RN7SKP227-201ENST00000364445 330 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 Y_RNA.560-201ENST00000384689 102 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AL031121.1-201ENST00000406553 254 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 U3.42-201ENST00000408746 214 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 RNU6-920P-201ENST00000410926 92 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 RN7SKP263-201ENST00000411194 309 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AL359704.1-201ENST00000411586 781 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 PPP1R11P2-201ENST00000423543 382 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AL445584.1-201ENST00000431451 330 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AL831737.1-201ENST00000441288 271 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 GDI2P2-201ENST00000445131 608 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 ZNF114P1-201ENST00000453500 292 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC234775.1-201ENST00000454247 670 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 RN7SL385P-201ENST00000468873 276 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 ARL4AP2-201ENST00000507378 601 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 RNU1-95P-201ENST00000516357 160 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 RNU1-128P-201ENST00000516704 160 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AP005205.1-201ENST00000563503 508 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC060771.1-201ENST00000582031 164 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC091965.4-201ENST00000607691 587 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 MIR6748-201ENST00000610433 71 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AL392048.1-201ENST00000613946 534 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC022079.1-201ENST00000621546 602 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AF246928.1-201ENST00000623768 87 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC097655.1-201ENST00000635075 318 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 MIR6733-201ENST00000635723 61 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 AC244258.1-201ENST00000637553 1071 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 LRRC77P-213ENST00000637727 880 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC63Q8NA47 MTCO1P9-201ENST00000505577 1534 ntBASIC3.19□□□□□ -1.9
CCDC63Q8NA47 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 U8.14-201ENST00000390843 143 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AL031577.2-201ENST00000404133 280 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 TPMTP3-201ENST00000411928 735 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AL512286.1-201ENST00000439244 400 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 EPS15P1-201ENST00000448836 336 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 RPL36AP33-201ENST00000450395 310 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 NUTF2P7-201ENST00000453086 375 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 MTND1P9-201ENST00000453775 944 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 RN7SL499P-201ENST00000481141 276 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC119751.5-201ENST00000514077 770 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 RNA5SP76-201ENST00000516277 87 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 SNORA70.16-201ENST00000516390 95 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC007834.2-201ENST00000536310 343 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC091489.2-201ENST00000566263 604 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC109446.2-201ENST00000567872 497 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC010653.1-201ENST00000571108 881 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 MIR3915-201ENST00000578518 97 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC106900.2-201ENST00000604994 317 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC008443.7-201ENST00000622195 246 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AL161637.1-201ENST00000622380 412 ntBASIC3.18□□□□□ -1.9
CCDC63Q8NA47 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms