Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC099654.7-201ENST00000635788 2127 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC011460.1-201ENST00000636268 1834 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AL161781.1-201ENST00000354277 403 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 RNU6-433P-201ENST00000363216 104 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 RNU6-744P-201ENST00000365557 107 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 RNU6-1316P-201ENST00000384242 108 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 RPS4XP3-201ENST00000398541 413 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 BX682237.1-201ENST00000415016 335 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 CCDC58P2-201ENST00000417131 366 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 HMGN2P30-201ENST00000423237 256 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC004975.1-201ENST00000428733 208 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 CETN4P-201ENST00000432407 469 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC092573.2-201ENST00000434546 243 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC122718.1-201ENST00000439448 744 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 MTND1P26-201ENST00000440488 538 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AL590664.1-201ENST00000448065 339 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AL133217.1-201ENST00000450980 425 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 CYCSP35-201ENST00000451978 304 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 ART2BP-201ENST00000453501 499 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AL359385.1-201ENST00000456509 365 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AL672167.3-201ENST00000465951 960 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC072039.1-201ENST00000477611 581 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AP004217.1-201ENST00000480579 346 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 MTATP6P15-201ENST00000527233 835 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 OR7K1P-201ENST00000546439 926 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 MIR3160-1-201ENST00000577972 85 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC020895.1-201ENST00000595362 272 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC090186.1-201ENST00000605991 572 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 U3.45-201ENST00000607547 219 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC103710.4-201ENST00000609301 899 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC002550.2-201ENST00000621246 394 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC243312.2-201ENST00000623340 601 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AP003485.2-201ENST00000623636 610 ntBASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC71LQ8N9Z2 AC011477.1-204ENST00000623416 1325 ntBASIC2.59□□□□□ -2
CCDC71LQ8N9Z2 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.59□□□□□ -2
CCDC71LQ8N9Z2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CCDC71LQ8N9Z2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AL672167.1-206ENST00000356293 943 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 RNU6-660P-201ENST00000364566 109 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 Y_RNA.302-201ENST00000364997 102 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 SNORD21-201ENST00000383953 95 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 RNU6-114P-201ENST00000384704 105 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 SNORA57.1-201ENST00000391227 145 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC110754.1-201ENST00000399740 601 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 VPS26BP1-201ENST00000417155 755 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC090774.1-201ENST00000435925 246 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC108734.1-201ENST00000439549 399 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 RPL21P23-201ENST00000446654 460 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 MTCO1P27-201ENST00000448269 226 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 RPL7P15-201ENST00000461190 712 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 MTCO2P6-201ENST00000463134 685 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AL049714.1-201ENST00000466686 347 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC104563.1-201ENST00000476147 376 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AL049874.1-201ENST00000489560 388 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC010486.2-201ENST00000505572 483 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 MRPS33P3-201ENST00000513456 322 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 RNU6-678P-201ENST00000516832 109 ntBASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.58□□□□□ -2
CCDC71LQ8N9Z2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms