Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC232271.1-201ENST00000602455 2715 ntBASIC5.54□□□□□ -1.52
NPAS3Q8IXF0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 ZNF299P-201ENST00000406845 1804 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 RNU6-933P-201ENST00000384424 107 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 Y_RNA.504-201ENST00000384481 104 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 HSPA8P15-201ENST00000401676 786 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 RN7SKP159-201ENST00000410657 292 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 MTATP6P4-201ENST00000427725 675 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 CBX1P4-201ENST00000439415 457 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AC079168.2-201ENST00000453977 416 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AC113155.1-201ENST00000511141 769 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AC091144.1-201ENST00000519573 138 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 MIR3684-201ENST00000579779 74 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 RN7SL356P-201ENST00000582228 248 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AC037487.3-201ENST00000606668 112 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 AL596245.1-201ENST00000618994 362 ntBASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
NPAS3Q8IXF0 INTS6P1-201ENST00000504674 2530 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC140479.2-201ENST00000421567 3130 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 Y_RNA.275-201ENST00000364726 110 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 Y_RNA.309-201ENST00000365046 111 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RN7SKP186-201ENST00000365371 303 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 SMIM11P1-201ENST00000369586 178 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RPL21P75-201ENST00000396599 483 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RPL21P28-201ENST00000401418 483 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AL022722.2-201ENST00000402519 180 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AL590556.1-201ENST00000423231 483 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RPL36P19-201ENST00000430744 301 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 TRBV26-201ENST00000456572 344 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 snoU13.20-201ENST00000459180 104 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RNU7-87P-201ENST00000459343 62 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 SNORD125-201ENST00000459538 96 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RPL21P11-201ENST00000461458 483 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RPL21P39-201ENST00000463605 483 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC132942.1-201ENST00000486753 483 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC093591.1-201ENST00000491435 481 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RPL21P16-201ENST00000495531 483 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 RN7SL591P-201ENST00000496150 292 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 SOD1P3-201ENST00000518682 454 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AL590099.1-201ENST00000615276 138 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 Y_RNA.778-201ENST00000620203 90 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AP000550.3-201ENST00000637734 379 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC073869.8-201ENST00000641806 335 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 MTND5P32-201ENST00000560711 1802 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC135776.4-201ENST00000624300 1904 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 AC114774.1-201ENST00000507410 1770 ntBASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NPAS3Q8IXF0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NPAS3Q8IXF0 AL137003.2-201ENST00000606924 2538 ntBASIC5.51□□□□□ -1.53
NPAS3Q8IXF0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NPAS3Q8IXF0 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms