Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU2-62P-201ENST00000410868 191 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 USP9YP13-201ENST00000417797 480 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 MTATP6P4-201ENST00000427725 675 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AL049734.2-201ENST00000441066 616 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC108860.1-201ENST00000484521 383 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC135721.1-201ENST00000497954 479 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC010424.1-201ENST00000506336 297 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC022616.6-201ENST00000520479 119 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AP002748.2-201ENST00000528671 348 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 OR4T1P-201ENST00000554933 911 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 ZNF519P3-201ENST00000557158 1032 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 RPL23AP84-201ENST00000571193 464 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 KC877982.1-201ENST00000602313 470 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AL137843.1-201ENST00000605078 385 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC004067.1-201ENST00000608733 700 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HERC6Q8IVU3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 GABPAP-201ENST00000419271 1356 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AP001486.2-201ENST00000561652 5113 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 Y_RNA.201-201ENST00000364052 96 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 RNU5A-8P-201ENST00000364102 114 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 MIR19A-201ENST00000384878 82 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AL109755.1-201ENST00000401791 649 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 HMGN1P14-201ENST00000412459 517 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 MTND1P28-201ENST00000435623 950 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 MTND1P27-201ENST00000451117 902 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 RPL9P32-201ENST00000464118 620 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AL359273.1-201ENST00000510918 627 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC105914.1-201ENST00000511798 226 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AP003467.2-201ENST00000520175 319 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 ERHP1-201ENST00000523006 310 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AP001804.3-201ENST00000525146 880 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC008011.1-201ENST00000545989 227 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 CBX3P5-201ENST00000552017 521 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AL391156.1-201ENST00000554965 554 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 MED28P6-201ENST00000558776 231 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC090877.1-201ENST00000561418 344 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC012414.6-201ENST00000568241 401 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 MIR3921-201ENST00000577308 85 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC008277.2-201ENST00000605196 797 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AL355472.4-201ENST00000610233 626 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 AC012150.2-201ENST00000621300 544 ntBASIC3.91□□□□□ -1.78
HERC6Q8IVU3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.91□□□□□ -1.78
HERC6Q8IVU3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HERC6Q8IVU3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.9□□□□□ -1.78
HERC6Q8IVU3 AL390237.1-201ENST00000404226 1415 ntBASIC3.9□□□□□ -1.78
HERC6Q8IVU3 RNU5A-1-201ENST00000362698 116 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 SNORA40.3-201ENST00000390964 122 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 HLFP1-201ENST00000402375 499 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 RHEBP3-201ENST00000411920 351 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 SPA17P1-201ENST00000416656 452 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 DBIP2-201ENST00000419076 262 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.9□□□□□ -1.79
HERC6Q8IVU3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.9□□□□□ -1.79
HERC6Q8IVU3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms