Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SDR42E1P4-201ENST00000620894 481 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 AC005183.1-201ENST00000603687 1979 ntBASIC5.71□□□□□ -1.5
RNF135Q8IUD6 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF135Q8IUD6 IRF5P1-201ENST00000504852 2164 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 MIR578-201ENST00000384828 96 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 MIR153-1-201ENST00000384914 90 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 RPS15AP6-201ENST00000420703 385 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AC090804.1-201ENST00000448870 490 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 CEACAMP6-201ENST00000452007 574 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 SNORD116-26-201ENST00000516006 96 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 RNU7-4P-201ENST00000516961 62 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 SNRPGP16-201ENST00000533275 226 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AC137627.1-201ENST00000545761 289 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 LRRC37A5P-203ENST00000580181 585 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AC209154.1-201ENST00000582156 337 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 MIR548AC-201ENST00000585049 88 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AC011447.4-201ENST00000587562 111 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 ZNF285B-201ENST00000561698 1767 ntBASIC5.7□□□□□ -1.5
RNF135Q8IUD6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF135Q8IUD6 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.214-201ENST00000364201 112 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 SNORD113-1-201ENST00000365321 69 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 RNA5SP87-201ENST00000384155 118 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 MIR23A-201ENST00000385245 73 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AP000580.1-201ENST00000404439 358 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 RPS16P5-201ENST00000406501 404 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 RBMY1KP-201ENST00000423480 476 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 VTI1BP4-201ENST00000427516 527 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AL132765.1-201ENST00000434165 553 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 RPS3AP12-201ENST00000443616 753 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 RPL29P29-201ENST00000448725 423 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 MTCO3P8-201ENST00000453691 755 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC069499.1-201ENST00000489433 509 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC012339.2-201ENST00000523996 453 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC008489.1-201ENST00000524271 483 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 CBX3P8-201ENST00000532412 525 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 MIR548AI-201ENST00000579940 88 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC009779.6-201ENST00000603972 165 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC083809.1-201ENST00000615051 472 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 AC091905.4-201ENST00000623432 202 ntBASIC5.69□□□□□ -1.5
RNF135Q8IUD6 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RNF135Q8IUD6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AL359854.1-201ENST00000614203 1594 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC126755.2-208ENST00000327792 462 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 AC138969.1-213ENST00000331436 462 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.26-201ENST00000362539 101 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.29-201ENST00000362570 113 ntBASIC5.68□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.48-201ENST00000362710 103 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms