Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AP001004.1-201ENST00000582468 324 ntBASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AC068790.3-201ENST00000602988 553 ntBASIC3.49□□□□□ -1.85
PRPF39Q86UA1 PRELID3BP8-201ENST00000604148 295 ntBASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AC112187.2-201ENST00000604345 283 ntBASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AL160281.1-201ENST00000605307 311 ntBASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF39Q86UA1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AC093838.1-201ENST00000613014 469 ntBASIC3.49□□□□□ -1.85
PRPF39Q86UA1 AL355493.4-201ENST00000618530 292 ntBASIC3.49□□□□□ -1.85
PRPF39Q86UA1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF39Q86UA1 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF39Q86UA1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF39Q86UA1 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AL356274.2-201ENST00000624379 3752 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 RNU1-39P-201ENST00000383897 165 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 U8.14-201ENST00000390843 143 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 RNA5SP31-201ENST00000411144 127 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 RPL23AP39-201ENST00000415533 405 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AL593851.1-201ENST00000426171 157 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AL390023.1-201ENST00000428836 262 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MTND5P25-201ENST00000430499 799 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 RPS20P20-201ENST00000460498 340 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC008155.2-201ENST00000464337 397 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 RN7SL330P-201ENST00000469709 307 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MTND4LP22-201ENST00000508209 276 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 IGKV2-26-201ENST00000518305 343 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC007954.1-201ENST00000554198 494 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MIR3186-201ENST00000577404 85 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MIR3200-201ENST00000580767 85 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MIR3609-201ENST00000582661 80 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC068313.1-201ENST00000604028 1008 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC007038.2-201ENST00000608095 740 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 AC010733.2-201ENST00000589496 5702 ntBASIC3.48□□□□□ -1.85
PRPF39Q86UA1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF39Q86UA1 MTND5P33-201ENST00000571250 1450 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC006378.2-201ENST00000623178 2476 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 SNORA38.1-201ENST00000364172 131 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 MIR325-201ENST00000385260 98 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AL109755.1-201ENST00000401791 649 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 RN7SKP111-201ENST00000410349 271 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 RNA5SP107-201ENST00000411358 122 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 MRPL50P2-201ENST00000416821 482 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 TAAR7P-201ENST00000436141 242 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 ATG12P2-201ENST00000456830 416 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AL031183.1-201ENST00000457667 207 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC004263.1-201ENST00000479327 332 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 TTC39CP1-201ENST00000512513 755 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC116347.2-201ENST00000514912 523 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC004024.1-201ENST00000549244 247 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 MTCO3P24-201ENST00000572729 782 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC005951.2-201ENST00000576282 495 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC006557.5-201ENST00000603126 811 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC013553.2-201ENST00000604244 589 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 HSPE1P7-201ENST00000604681 321 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 BCRP9-201ENST00000605312 388 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC013476.2-201ENST00000614456 459 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.47□□□□□ -1.85
PRPF39Q86UA1 AC010133.1-201ENST00000615809 842 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms