Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 Y_RNA.433-201ENST00000384089 102 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 MIR216A-201ENST00000385063 110 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 RPL17P12-201ENST00000413391 526 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AL357078.2-201ENST00000416486 427 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 HMGB1P12-201ENST00000438594 598 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 VN1R96P-201ENST00000446052 858 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 COX6CP12-201ENST00000446748 202 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AC008127.2-201ENST00000549925 1075 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 AC098679.5-201ENST00000624394 571 ntBASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
CSPG4Q6UVK1 MIRLET7G-201ENST00000362280 84 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 HSPE1P1-201ENST00000421494 318 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC021382.1-201ENST00000483523 359 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC023813.2-201ENST00000564321 469 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC096772.1-201ENST00000609146 564 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC132825.8-201ENST00000640783 297 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 RPS6P15-201ENST00000431996 751 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC073901.1-201ENST00000462471 408 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 PRELID2P1-201ENST00000552837 301 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 AC007229.1-201ENST00000590455 412 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 7SK.7-201ENST00000603504 247 ntBASIC1.24□□□□□ -2.21
CSPG4Q6UVK1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AL691517.1-201ENST00000440833 1235 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 NPM1P52-201ENST00000518264 846 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC084364.2-201ENST00000546924 395 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 CR383656.8-201ENST00000549046 145 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC010735.1-201ENST00000567305 1026 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC008133.2-201ENST00000624540 351 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC007560.1-201ENST00000426912 237 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AL445305.1-201ENST00000432577 575 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 MTCO1P48-201ENST00000448024 1096 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 SNRPFP3-201ENST00000457792 225 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC087190.1-201ENST00000484462 480 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC104115.2-201ENST00000523026 687 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AP000907.2-201ENST00000530827 353 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 RN7SL793P-201ENST00000583259 296 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC013553.2-201ENST00000604244 589 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 AC243773.3-201ENST00000613270 256 ntBASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CSPG4Q6UVK1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 RNA5SP257-201ENST00000363023 116 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 RNA5SP62-201ENST00000363457 110 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 RNA5SP189-201ENST00000364920 115 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 MIR193B-201ENST00000384907 83 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 HMGB3P2-201ENST00000411913 584 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 AC023128.2-201ENST00000420880 1223 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 MIR3935-201ENST00000583472 104 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 AC011468.4-201ENST00000603942 409 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 NUP58P1-201ENST00000502546 1738 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 PABPC1P7-201ENST00000413177 1513 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
CSPG4Q6UVK1 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms