Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC026979.1-201ENST00000492525 396 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 MTCO3P44-201ENST00000510977 541 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 RNA5SP392-201ENST00000516905 112 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 RN7SKP92-201ENST00000517266 244 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 SNORA81.3-201ENST00000517283 198 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC012339.2-201ENST00000523996 453 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC024224.1-201ENST00000538284 609 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 DYNLL1P4-201ENST00000549314 266 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC091042.1-201ENST00000579213 173 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 MIR1254-2-201ENST00000579553 63 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 MIR5692C1-201ENST00000585309 91 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 HMGB1P50-201ENST00000605814 607 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AC055839.1-201ENST00000634467 498 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 AL138713.1-201ENST00000624026 2130 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF43Q68DV7 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF43Q68DV7 BDP1P-201ENST00000582658 1990 ntBASIC5.15□□□□□ -1.59
RNF43Q68DV7 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 MFSD8-216ENST00000641147 4009 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF43Q68DV7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC097461.1-201ENST00000568928 2821 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 OR56A5-201ENST00000340110 738 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC068538.1-201ENST00000376856 336 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 RNU6-306P-201ENST00000384617 107 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 HMGB3P7-201ENST00000400214 611 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AL035079.1-201ENST00000405210 287 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 Z99755.1-201ENST00000414048 380 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 ELOCP20-201ENST00000422460 345 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 RPL7P37-201ENST00000425095 738 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 RPL18P10-201ENST00000425606 538 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 USP9YP30-201ENST00000430729 455 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC133473.1-201ENST00000455173 299 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC005229.2-201ENST00000456995 399 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 DYNLL1P5-201ENST00000467158 270 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC006967.1-201ENST00000467608 589 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 RPL7P5-201ENST00000471472 736 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC020890.1-201ENST00000491837 504 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 ENPP7P9-201ENST00000514456 627 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 RNU6-1332P-201ENST00000516666 104 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 SETP7-201ENST00000552169 453 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 MIR5096-201ENST00000583713 70 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC011494.1-201ENST00000596454 237 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 RPL23AP92-201ENST00000603609 255 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 U6.104-201ENST00000637979 90 ntBASIC5.14□□□□□ -1.59
RNF43Q68DV7 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF43Q68DV7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF43Q68DV7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RNF43Q68DV7 AC074029.4-201ENST00000624796 1859 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 Y_RNA.64-201ENST00000362845 102 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 RNU6-188P-201ENST00000364207 107 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 Y_RNA.462-201ENST00000384268 102 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 RNU6-1127P-201ENST00000384580 107 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 RNU6-550P-201ENST00000391057 101 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AL136372.1-201ENST00000403060 228 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 RNU6-55P-201ENST00000411092 107 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AC011933.1-201ENST00000413334 321 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 RPL10P17-201ENST00000453852 316 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 SNORD5.1-201ENST00000458800 75 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 snoU13.1-201ENST00000459157 104 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AP001992.1-205ENST00000462248 379 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AC108860.1-201ENST00000484521 383 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AP002812.1-201ENST00000495378 474 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 MIR3667-201ENST00000581025 74 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AL031176.1-201ENST00000604554 466 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 AL596245.1-201ENST00000618994 362 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AL136313.1-201ENST00000624804 202 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 CR381572.2-201ENST00000624852 397 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 AC091925.2-201ENST00000625059 256 ntBASIC5.13□□□□□ -1.59
RNF43Q68DV7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.13□□□□□ -1.59
RNF43Q68DV7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF43Q68DV7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms