Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL022718.1-201ENST00000412004 84 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AL356806.1-201ENST00000422524 916 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 MTATP6P11-201ENST00000428071 670 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AL445687.1-201ENST00000439946 251 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AC092185.1-201ENST00000491371 97 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 RNA5SP210-201ENST00000391034 120 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 PGBD4P3-201ENST00000440731 581 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 MIR4653-201ENST00000585107 83 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 SNORD114-23-201ENST00000363536 72 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 RPS23P3-201ENST00000470993 430 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AC110741.2-201ENST00000605278 268 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 ZNF876P-202ENST00000398732 1485 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 AC022960.2-201ENST00000616300 666 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 LINC00901.1-201ENST00000617252 152 ntBASIC0.96□□□□□ -2.26
UBR4Q5T4S7 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
UBR4Q5T4S7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 RNU6-222P-201ENST00000362438 107 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 SNRPEP2-201ENST00000397592 279 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL356776.1-201ENST00000406574 447 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 RPL26P37-201ENST00000411983 438 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 HMGN2P20-201ENST00000437531 273 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL590664.1-201ENST00000448065 339 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL049830.2-201ENST00000480072 201 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC093801.2-201ENST00000503966 1050 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 RPL23AP78-201ENST00000599928 470 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AP003117.1-201ENST00000602771 554 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL078605.1-201ENST00000603529 500 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC090517.3-201ENST00000625170 141 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 BX649567.1-201ENST00000642071 1134 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 CR382285.2-201ENST00000624662 1495 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 OFD1P1Y-201ENST00000411756 1225 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 LINC01347-201ENST00000417964 355 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 GTF2IP12-201ENST00000456547 356 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 RPL21P131-201ENST00000497298 483 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC109464.2-201ENST00000510242 943 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC091515.1-201ENST00000548110 679 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC009314.1-201ENST00000603871 304 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 USP9YP8-201ENST00000441913 500 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC023790.1-201ENST00000482174 347 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL513175.2-201ENST00000422071 443 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 BMI1P1-201ENST00000445879 941 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 RPL26P9-201ENST00000457466 433 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AP000889.2-201ENST00000532684 490 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AL031775.1-201ENST00000607014 887 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 AC007742.2-201ENST00000618226 398 ntBASIC0.95□□□□□ -2.26
UBR4Q5T4S7 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 Y_RNA.468-201ENST00000384298 102 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 CBX3P7-201ENST00000532876 502 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC091057.2-201ENST00000602594 792 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 RPL21P136-201ENST00000605378 396 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 MTND4P23-201ENST00000447723 1363 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 Z85994.2-201ENST00000434327 452 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC016691.1-201ENST00000441321 413 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 IGLVIV-53-201ENST00000520107 367 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 MTND4LP24-201ENST00000572277 291 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AL160237.3-201ENST00000604114 1013 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC024560.3-201ENST00000608482 349 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AL445493.3-201ENST00000619568 477 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 RNA5SP344-201ENST00000411081 104 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC092638.1-201ENST00000411966 1275 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC0.94□□□□□ -2.26
UBR4Q5T4S7 AC108676.2-201ENST00000605225 163 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 VN1R74P-201ENST00000613259 503 ntBASIC0.94□□□□□ -2.26
UBR4Q5T4S7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms