Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AL356131.1-201ENST00000405826 414 ntBASIC2.56□□□□□ -2
RFX4Q33E94 RNU6-584P-201ENST00000410350 95 ntBASIC2.56□□□□□ -2
RFX4Q33E94 SSR1P2-201ENST00000415208 787 ntBASIC2.56□□□□□ -2
RFX4Q33E94 MTATP6P27-201ENST00000416987 621 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AL139421.1-201ENST00000423010 169 ntBASIC2.56□□□□□ -2
RFX4Q33E94 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.56□□□□□ -2
RFX4Q33E94 FGF7P5-201ENST00000441829 291 ntBASIC2.56□□□□□ -2
RFX4Q33E94 BX322784.1-201ENST00000455793 1077 ntBASIC2.56□□□□□ -2
RFX4Q33E94 RPL23AP31-201ENST00000456160 467 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.56□□□□□ -2
RFX4Q33E94 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.56□□□□□ -2
RFX4Q33E94 AC009901.1-201ENST00000506703 541 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC017037.2-201ENST00000513850 890 ntBASIC2.56□□□□□ -2
RFX4Q33E94 RNU6-415P-201ENST00000516252 97 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC090136.1-201ENST00000520009 240 ntBASIC2.56□□□□□ -2
RFX4Q33E94 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.56□□□□□ -2
RFX4Q33E94 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFX4Q33E94 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.56□□□□□ -2
RFX4Q33E94 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.56□□□□□ -2
RFX4Q33E94 OR7K1P-201ENST00000546439 926 ntBASIC2.56□□□□□ -2
RFX4Q33E94 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFX4Q33E94 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.56□□□□□ -2
RFX4Q33E94 MED28P6-201ENST00000558776 231 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.56□□□□□ -2
RFX4Q33E94 AL022099.1-201ENST00000604551 712 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC019159.1-201ENST00000605094 187 ntBASIC2.56□□□□□ -2
RFX4Q33E94 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC022960.3-201ENST00000619794 441 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC010297.1-201ENST00000623948 149 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AC004777.1-201ENST00000624317 287 ntBASIC2.56□□□□□ -2
RFX4Q33E94 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AP000776.1-201ENST00000530032 1663 ntBASIC2.56□□□□□ -2
RFX4Q33E94 AL079343.1-201ENST00000572358 1771 ntBASIC2.56□□□□□ -2
RFX4Q33E94 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFX4Q33E94 FRG1BP-201ENST00000278882 761 ntBASIC2.55□□□□□ -2
RFX4Q33E94 RNA5SP374-201ENST00000362939 125 ntBASIC2.55□□□□□ -2
RFX4Q33E94 SNORD56.5-201ENST00000364281 72 ntBASIC2.55□□□□□ -2
RFX4Q33E94 RNU1-100P-201ENST00000365255 165 ntBASIC2.55□□□□□ -2
RFX4Q33E94 SNORA1.3-201ENST00000384676 136 ntBASIC2.55□□□□□ -2
RFX4Q33E94 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
RFX4Q33E94 RNU6-882P-201ENST00000391025 103 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AL031679.1-201ENST00000400616 525 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AL136372.1-201ENST00000403060 228 ntBASIC2.55□□□□□ -2
RFX4Q33E94 MIR1284-201ENST00000408337 120 ntBASIC2.55□□□□□ -2
RFX4Q33E94 RPS15AP38-201ENST00000413110 372 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AL512649.1-201ENST00000428997 581 ntBASIC2.55□□□□□ -2
RFX4Q33E94 RPS25P9-201ENST00000435591 252 ntBASIC2.55□□□□□ -2
RFX4Q33E94 RAC1P7-201ENST00000445367 377 ntBASIC2.55□□□□□ -2
RFX4Q33E94 NIPA2P5-201ENST00000452282 464 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.55□□□□□ -2
RFX4Q33E94 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.55□□□□□ -2
RFX4Q33E94 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.55□□□□□ -2
RFX4Q33E94 AC126182.1-201ENST00000478134 357 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.55□□□□□ -2
RFX4Q33E94 SRIP1-201ENST00000489235 288 ntBASIC2.55□□□□□ -2
RFX4Q33E94 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFX4Q33E94 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.55□□□□□ -2
RFX4Q33E94 AC104090.1-201ENST00000506341 1171 ntBASIC2.55□□□□□ -2
RFX4Q33E94 MLLT10P2-201ENST00000506434 249 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.55□□□□□ -2
RFX4Q33E94 TPT1P8-201ENST00000510120 555 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AC109445.1-201ENST00000512356 383 ntBASIC2.55□□□□□ -2
RFX4Q33E94 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.55□□□□□ -2
RFX4Q33E94 SCGB1D5P-201ENST00000515134 247 ntBASIC2.55□□□□□ -2
RFX4Q33E94 RNU6-150P-201ENST00000516237 95 ntBASIC2.55□□□□□ -2
RFX4Q33E94 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RFX4Q33E94 MTND2P32-201ENST00000521584 1038 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AC087373.1-201ENST00000524920 491 ntBASIC2.55□□□□□ -2
RFX4Q33E94 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFX4Q33E94 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.55□□□□□ -2
RFX4Q33E94 H3F3AP1-201ENST00000559984 334 ntBASIC2.55□□□□□ -2
RFX4Q33E94 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.55□□□□□ -2
RFX4Q33E94 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.55□□□□□ -2
RFX4Q33E94 AC006539.2-201ENST00000601729 572 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AL450336.1-201ENST00000605180 586 ntBASIC2.55□□□□□ -2
RFX4Q33E94 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.55□□□□□ -2
RFX4Q33E94 AL445264.1-201ENST00000621719 171 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AC002064.3-201ENST00000623448 346 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AC231657.1-201ENST00000624313 397 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AC079228.1-201ENST00000624774 1049 ntBASIC2.55□□□□□ -2
RFX4Q33E94 AL390862.1-201ENST00000635467 1469 ntBASIC2.55□□□□□ -2
RFX4Q33E94 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RFX4Q33E94 AC099654.7-201ENST00000635788 2127 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC000403.1-201ENST00000613696 3585 ntBASIC2.54□□□□□ -2
RFX4Q33E94 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
RFX4Q33E94 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.54□□□□□ -2
RFX4Q33E94 SNORD46.1-201ENST00000364139 104 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AL137014.1-201ENST00000420490 1226 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.54□□□□□ -2
RFX4Q33E94 AC022018.1-201ENST00000430685 241 ntBASIC2.54□□□□□ -2
RFX4Q33E94 RPS20P5-201ENST00000434808 360 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC084290.1-201ENST00000434995 374 ntBASIC2.54□□□□□ -2
RFX4Q33E94 MTND4P6-201ENST00000438297 472 ntBASIC2.54□□□□□ -2
RFX4Q33E94 SDCBPP1-201ENST00000440192 890 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.54□□□□□ -2
RFX4Q33E94 EEF1E1P1-201ENST00000446998 430 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC104978.1-201ENST00000449387 391 ntBASIC2.54□□□□□ -2
RFX4Q33E94 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms