Protein–RNA interactions for Protein: Q14683

SMC1A, Structural maintenance of chromosomes protein 1A, humanhuman

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1AQ14683 AC004944.1-201ENST00000517807 3059 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 ZNF29P-201ENST00000225587 168 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 U8.9-201ENST00000365667 134 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMC1AQ14683 MIR887-201ENST00000401258 79 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 DHFRP6-201ENST00000401776 268 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 MTCO2P8-201ENST00000412213 658 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AC106883.1-201ENST00000418805 562 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC1AQ14683 AL590383.1-201ENST00000428602 75 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 ARPC3P1-201ENST00000437218 533 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 USP9YP22-201ENST00000438971 294 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 SDCBPP1-201ENST00000440192 890 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.32□□□□□ -1.88
SMC1AQ14683 AC016696.1-201ENST00000446949 318 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.32□□□□□ -1.88
SMC1AQ14683 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.32□□□□□ -1.88
SMC1AQ14683 RNU6-420P-201ENST00000458780 107 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AC017037.2-201ENST00000513850 890 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.32□□□□□ -1.88
SMC1AQ14683 RNU6-928P-201ENST00000516876 104 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SMC1AQ14683 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC1AQ14683 AADACP1-206ENST00000561502 1193 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.32□□□□□ -1.88
SMC1AQ14683 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC1AQ14683 AC078899.3-201ENST00000599065 212 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC1AQ14683 RNU4-5P-201ENST00000607255 135 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.32□□□□□ -1.88
SMC1AQ14683 AC024257.5-201ENST00000612739 531 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AC243773.3-201ENST00000613270 256 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 OR4G3P-201ENST00000633500 913 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 OR5H6-203ENST00000642105 978 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 CDR1-202ENST00000625883 1485 ntBASIC3.32□□□□□ -1.88
SMC1AQ14683 AC138915.1-201ENST00000565427 1685 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC1AQ14683 AL356473.1-201ENST00000406203 1408 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMC1AQ14683 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMC1AQ14683 RNU6-76P-201ENST00000384060 104 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SMC1AQ14683 RNU4-22P-201ENST00000411058 166 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 AL592310.1-201ENST00000414330 671 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 EEF1A1P41-201ENST00000414667 207 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 AL513477.1-202ENST00000417061 214 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 RPS3AP37-201ENST00000419176 745 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC1AQ14683 MTCYBP45-201ENST00000435243 565 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 AC129850.1-201ENST00000436203 508 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 COX6CP2-201ENST00000444980 225 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 HSPE1P6-201ENST00000479457 291 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 AC108734.3-201ENST00000481241 1165 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 OR2A20P-203ENST00000498397 1268 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC1AQ14683 OR5G4P-201ENST00000525251 760 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC1AQ14683 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.31□□□□□ -1.88
SMC1AQ14683 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC1AQ14683 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC1AQ14683 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.31□□□□□ -1.88
SMC1AQ14683 AC083760.1-201ENST00000589621 670 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 MTCO2P2-201ENST00000591258 225 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 AC010620.2-201ENST00000600135 313 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SMC1AQ14683 AL596245.1-201ENST00000618994 362 ntBASIC3.31□□□□□ -1.88
SMC1AQ14683 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.31□□□□□ -1.88
SMC1AQ14683 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SMC1AQ14683 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SMC1AQ14683 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SMC1AQ14683 MTCO1P9-201ENST00000505577 1534 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SMC1AQ14683 AC109315.1-201ENST00000584143 1347 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 NACA3P-201ENST00000359690 648 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 SNORD56.5-201ENST00000364281 72 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
SMC1AQ14683 SNORA26.7-201ENST00000391288 122 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC1AQ14683 RPL7P25-201ENST00000404151 721 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 MRPS36P1-201ENST00000421291 307 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC1AQ14683 NANOGP5-201ENST00000424456 877 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 RPL7P37-201ENST00000425095 738 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 AC109583.1-201ENST00000432156 268 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 TAAR7P-201ENST00000436141 242 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 AC108734.1-201ENST00000439549 399 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 EEF1A1P39-201ENST00000440791 250 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 GSTA11P-201ENST00000452866 669 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 AL590639.1-201ENST00000456484 337 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 DUXAP8-207ENST00000456786 622 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC1AQ14683 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC1AQ14683 MTND4LP3-201ENST00000468320 276 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 AL049874.1-201ENST00000489560 388 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 AC114981.1-201ENST00000503897 678 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 MTCYBP16-201ENST00000509187 1129 ntBASIC3.3□□□□□ -1.88
SMC1AQ14683 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.3□□□□□ -1.88
SMC1AQ14683 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
SMC1AQ14683 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms