Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL591719.1-201ENST00000444669 744 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 EEF1E1P1-201ENST00000446998 430 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AC002381.1-201ENST00000447049 280 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.23□□□□□ -1.89
GABPAQ06546 HMGN2P16-201ENST00000456802 261 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 RPL21P8-201ENST00000465083 535 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AP002884.2-201ENST00000471647 395 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.23□□□□□ -1.89
GABPAQ06546 AC034244.1-201ENST00000507687 207 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 RPL12P22-201ENST00000519073 490 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.23□□□□□ -1.89
GABPAQ06546 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.23□□□□□ -1.89
GABPAQ06546 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABPAQ06546 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
GABPAQ06546 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC3.23□□□□□ -1.89
GABPAQ06546 AL391001.1-201ENST00000602747 715 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.23□□□□□ -1.89
GABPAQ06546 AC107294.3-201ENST00000609211 526 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AL355810.1-201ENST00000614629 552 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 AL357080.1-201ENST00000617394 239 ntBASIC3.23□□□□□ -1.89
GABPAQ06546 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.23□□□□□ -1.89
GABPAQ06546 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
GABPAQ06546 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.22□□□□□ -1.89
GABPAQ06546 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
GABPAQ06546 RNU6-859P-201ENST00000362728 107 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 SNORA4.1-201ENST00000364263 144 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 U3.12-201ENST00000364498 214 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 RNU4-28P-201ENST00000364739 141 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
GABPAQ06546 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.22□□□□□ -1.89
GABPAQ06546 MTCO1P39-201ENST00000426148 480 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 MTND1P32-201ENST00000433043 938 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 RPL23AP31-201ENST00000456160 467 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 RPS3P1-201ENST00000456781 192 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AP004217.1-201ENST00000480579 346 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AC118465.1-201ENST00000513820 1271 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AC093677.1-201ENST00000514414 678 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 IGHV3-76-201ENST00000522465 295 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.22□□□□□ -1.89
GABPAQ06546 OR6C7P-201ENST00000547875 934 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.22□□□□□ -1.89
GABPAQ06546 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.22□□□□□ -1.89
GABPAQ06546 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.22□□□□□ -1.89
GABPAQ06546 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.22□□□□□ -1.89
GABPAQ06546 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.22□□□□□ -1.89
GABPAQ06546 OR4K8P-201ENST00000578842 1048 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 ZNF861P-201ENST00000588126 639 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AL031281.1-201ENST00000604049 488 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AL022099.1-201ENST00000604551 712 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 TUSC7.1-201ENST00000610969 165 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AL139418.1-201ENST00000613613 177 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AL136981.2-201ENST00000617319 734 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AL596245.1-201ENST00000618994 362 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 Z99129.2-201ENST00000619967 314 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AL445264.1-201ENST00000621719 171 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AL360181.4-201ENST00000621752 134 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AC006111.3-201ENST00000622137 383 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.22□□□□□ -1.89
GABPAQ06546 SNORA50A-202ENST00000629536 136 ntBASIC3.22□□□□□ -1.89
GABPAQ06546 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.22□□□□□ -1.89
GABPAQ06546 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
GABPAQ06546 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.21□□□□□ -1.89
GABPAQ06546 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPAQ06546 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
GABPAQ06546 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
GABPAQ06546 MIR26A1-201ENST00000362205 77 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 RNU6-289P-201ENST00000364093 107 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
GABPAQ06546 HIGD1AP15-201ENST00000416198 280 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPAQ06546 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.21□□□□□ -1.9
GABPAQ06546 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPAQ06546 AL590103.1-201ENST00000434488 307 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 RABEPKP1-201ENST00000440529 1026 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPAQ06546 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPAQ06546 snoU13.8-201ENST00000458890 104 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPAQ06546 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPAQ06546 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPAQ06546 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.21□□□□□ -1.9
GABPAQ06546 AC023050.2-201ENST00000544968 387 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AC027807.1-201ENST00000559921 996 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPAQ06546 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPAQ06546 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.21□□□□□ -1.9
GABPAQ06546 AC022022.2-201ENST00000602989 360 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AL133507.1-201ENST00000605269 557 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AC112220.3-201ENST00000605502 502 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 TUG1_1.1-201ENST00000610654 145 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AL020991.1-201ENST00000612314 373 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AL590099.1-201ENST00000615276 138 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 AC095031.1-201ENST00000623685 672 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 TAB3P1-202ENST00000452645 1634 ntBASIC3.21□□□□□ -1.9
GABPAQ06546 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.21□□□□□ -1.9
GABPAQ06546 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
GABPAQ06546 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms