Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 RN7SKP226-201ENST00000364912 300 ntBASIC1.67□□□□□ -2.14
RPL28P46779 SNORA44-201ENST00000384584 132 ntBASIC1.67□□□□□ -2.14
RPL28P46779 MIR9-1-201ENST00000385198 89 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AL162578.1-201ENST00000406202 378 ntBASIC1.67□□□□□ -2.14
RPL28P46779 RPS4XP7-201ENST00000406274 780 ntBASIC1.67□□□□□ -2.14
RPL28P46779 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC096664.2-201ENST00000411843 406 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC027644.1-201ENST00000419595 298 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL28P46779 AC019178.2-201ENST00000423595 505 ntBASIC1.67□□□□□ -2.14
RPL28P46779 MTCYBP32-201ENST00000427945 1084 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AL139132.1-201ENST00000431587 344 ntBASIC1.67□□□□□ -2.14
RPL28P46779 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL28P46779 CYCSP32-201ENST00000440548 321 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC011816.1-201ENST00000441346 546 ntBASIC1.67□□□□□ -2.14
RPL28P46779 DPPA3P1-201ENST00000448050 469 ntBASIC1.67□□□□□ -2.14
RPL28P46779 COX6CP18-201ENST00000448769 222 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC133134.1-201ENST00000466800 359 ntBASIC1.67□□□□□ -2.14
RPL28P46779 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.67□□□□□ -2.14
RPL28P46779 RPS3AP14-201ENST00000483907 780 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC011825.1-201ENST00000484967 388 ntBASIC1.67□□□□□ -2.14
RPL28P46779 FAM172BP-201ENST00000487497 1089 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL28P46779 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL28P46779 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL28P46779 NDUFB4P2-201ENST00000509515 391 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC096725.1-201ENST00000514266 313 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL28P46779 SNORA74D-201ENST00000516404 141 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL28P46779 AC024224.1-201ENST00000538284 609 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC006518.2-201ENST00000542513 940 ntBASIC1.67□□□□□ -2.14
RPL28P46779 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL28P46779 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.67□□□□□ -2.14
RPL28P46779 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL28P46779 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL28P46779 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.67□□□□□ -2.14
RPL28P46779 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.67□□□□□ -2.14
RPL28P46779 RPAP2P1-201ENST00000603626 1168 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC068313.1-201ENST00000604028 1008 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AL161756.2-201ENST00000604597 246 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC103710.4-201ENST00000609301 899 ntBASIC1.67□□□□□ -2.14
RPL28P46779 MIR8084-201ENST00000614105 89 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AL450472.3-201ENST00000615578 367 ntBASIC1.67□□□□□ -2.14
RPL28P46779 HMGB1P24-202ENST00000615653 685 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC003001.2-201ENST00000616294 831 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC1.67□□□□□ -2.14
RPL28P46779 AL445493.3-201ENST00000619568 477 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AP001002.2-201ENST00000625137 386 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AL137790.1-201ENST00000634283 177 ntBASIC1.67□□□□□ -2.14
RPL28P46779 AC007785.2-201ENST00000598627 1916 ntBASIC1.67□□□□□ -2.14
RPL28P46779 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPL28P46779 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
RPL28P46779 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPL28P46779 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
RPL28P46779 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPL28P46779 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL28P46779 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RPL28P46779 MIRLET7G-201ENST00000362280 84 ntBASIC1.66□□□□□ -2.14
RPL28P46779 MIR208A-201ENST00000362287 71 ntBASIC1.66□□□□□ -2.14
RPL28P46779 RNU6-1066P-201ENST00000363573 105 ntBASIC1.66□□□□□ -2.14
RPL28P46779 SNORA67.1-201ENST00000364749 141 ntBASIC1.66□□□□□ -2.14
RPL28P46779 SNORA70.4-201ENST00000365509 134 ntBASIC1.66□□□□□ -2.14
RPL28P46779 MIR514A1-201ENST00000385133 98 ntBASIC1.66□□□□□ -2.14
RPL28P46779 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL28P46779 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPL28P46779 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL28P46779 BX664727.1-201ENST00000416024 466 ntBASIC1.66□□□□□ -2.14
RPL28P46779 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
RPL28P46779 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.66□□□□□ -2.14
RPL28P46779 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.66□□□□□ -2.14
RPL28P46779 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
RPL28P46779 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL28P46779 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL28P46779 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.66□□□□□ -2.14
RPL28P46779 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.66□□□□□ -2.14
RPL28P46779 HIGD1AP13-201ENST00000509878 289 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AC121161.1-201ENST00000510606 652 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AP003467.2-201ENST00000520175 319 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AC087808.1-201ENST00000520501 361 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL28P46779 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AC113192.3-201ENST00000529152 742 ntBASIC1.66□□□□□ -2.14
RPL28P46779 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RPL28P46779 AC124947.2-202ENST00000552735 133 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AC121758.2-201ENST00000553271 193 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL28P46779 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL28P46779 AC074050.1-201ENST00000563247 211 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL28P46779 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.66□□□□□ -2.14
RPL28P46779 MIR3616-201ENST00000584070 92 ntBASIC1.66□□□□□ -2.14
RPL28P46779 AL356280.1-201ENST00000603614 379 ntBASIC1.66□□□□□ -2.14
RPL28P46779 DUXAP10-204ENST00000612052 616 ntBASIC1.66□□□□□ -2.14
RPL28P46779 VN1R74P-201ENST00000613259 503 ntBASIC1.66□□□□□ -2.14
RPL28P46779 MIR6895-201ENST00000613497 78 ntBASIC1.66□□□□□ -2.14
RPL28P46779 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
RPL28P46779 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.66□□□□□ -2.14
RPL28P46779 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
RPL28P46779 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms