Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RPL21P89-201ENST00000444021 467 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 MTND1P1-201ENST00000445453 368 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AL136380.1-201ENST00000447970 162 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 RPS23P3-201ENST00000470993 430 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC091167.1-201ENST00000492017 396 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-1P43699 NDUFB4P2-201ENST00000509515 391 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 RAB9BP1-201ENST00000519581 626 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AP003392.2-201ENST00000527269 208 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 DEFB108A-201ENST00000530110 222 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC123904.2-201ENST00000548059 300 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 CCNG2P1-201ENST00000549521 1000 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC245014.2-201ENST00000603689 287 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC246785.4-201ENST00000605374 287 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC004492.1-201ENST00000607036 742 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AC006566.1-201ENST00000608943 513 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AL390240.1-201ENST00000612950 384 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC008250.2-201ENST00000615261 205 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.08□□□□□ -1.92
NKX2-1P43699 AC112204.3-201ENST00000623822 332 ntBASIC3.08□□□□□ -1.92
NKX2-1P43699 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.08□□□□□ -1.92
NKX2-1P43699 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-1P43699 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.08□□□□□ -1.92
NKX2-1P43699 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.08□□□□□ -1.92
NKX2-1P43699 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-1P43699 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NKX2-1P43699 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-1P43699 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-1P43699 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-1P43699 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NKX2-1P43699 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
NKX2-1P43699 Y_RNA.3-201ENST00000362331 103 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 Y_RNA.6-201ENST00000362350 114 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.07□□□□□ -1.92
NKX2-1P43699 RPS26P8-201ENST00000393490 348 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC110754.1-201ENST00000399740 601 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AL136116.1-201ENST00000403591 381 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 TXNP7-201ENST00000406296 293 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-1P43699 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-1P43699 ELOCP17-201ENST00000414751 326 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-1P43699 YPEL5P1-201ENST00000419731 367 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.07□□□□□ -1.92
NKX2-1P43699 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-1P43699 AL590383.1-201ENST00000428602 75 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 C8orf59P1-201ENST00000429930 303 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 ARF4P2-201ENST00000430209 526 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 USP12PX-201ENST00000432383 1057 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 SNRPEP4-201ENST00000435815 279 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 TIMM9P1-201ENST00000436122 256 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC006480.1-201ENST00000449887 378 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-1P43699 RNU7-170P-201ENST00000459303 61 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 KLF3P2-201ENST00000465138 268 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 RPL23AP14-201ENST00000468281 468 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 RPS15AP36-201ENST00000492022 382 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 RPS27AP13-201ENST00000498403 237 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 PCBP2P3-201ENST00000509726 843 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 FTH1P21-201ENST00000512179 511 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 RNA5SP208-201ENST00000516156 78 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 SCARNA15.2-201ENST00000516409 127 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 SNORA18.6-201ENST00000516792 115 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 RNU6-430P-201ENST00000517078 107 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC107934.1-201ENST00000522215 217 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AP003181.2-201ENST00000528941 181 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.07□□□□□ -1.92
NKX2-1P43699 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.07□□□□□ -1.92
NKX2-1P43699 ZNF519P2-201ENST00000557032 169 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.07□□□□□ -1.92
NKX2-1P43699 MTND1P15-201ENST00000579262 949 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.07□□□□□ -1.92
NKX2-1P43699 AC073648.5-201ENST00000603502 305 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC106900.2-201ENST00000604994 317 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 RMST_8.1-201ENST00000610287 165 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC245517.5-201ENST00000611529 162 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 XIST_intron.1-201ENST00000619444 68 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 AC091953.2-201ENST00000623979 160 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-1P43699 LARP1BP1-201ENST00000506036 1359 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-1P43699 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.07□□□□□ -1.92
NKX2-1P43699 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NKX2-1P43699 CUL1P1-201ENST00000509510 2425 ntBASIC3.07□□□□□ -1.92
NKX2-1P43699 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms