Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AL049794.2-201ENST00000616301 365 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CHRNA4P43681 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA4P43681 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CHRNA4P43681 AC010266.2-201ENST00000564741 3255 ntBASIC5.18□□□□□ -1.58
CHRNA4P43681 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CHRNA4P43681 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.18□□□□□ -1.58
CHRNA4P43681 GABPAP-201ENST00000419271 1356 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AC004158.1-201ENST00000564508 4319 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA4P43681 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AC090740.1-201ENST00000623193 2262 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.17□□□□□ -1.58
CHRNA4P43681 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA4P43681 SNORA17.1-201ENST00000362945 126 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 RNA5SP205-201ENST00000364653 136 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 Y_RNA.497-201ENST00000384447 98 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 Y_RNA.541-201ENST00000384640 113 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AC009238.2-201ENST00000431026 355 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AL163193.1-201ENST00000444895 788 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA4P43681 RBMY2TP-201ENST00000451162 947 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 TRBV26-201ENST00000456572 344 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 SNORD97-201ENST00000459187 142 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 RN7SL172P-201ENST00000460535 303 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AC008953.1-201ENST00000497334 318 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AC008958.1-201ENST00000511047 682 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 NDUFB4P9-201ENST00000511646 388 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 SCARNA24.2-201ENST00000516968 130 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.17□□□□□ -1.58
CHRNA4P43681 LSM6P2-201ENST00000552208 177 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.17□□□□□ -1.58
CHRNA4P43681 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AC136932.1-201ENST00000574771 208 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AL136313.1-201ENST00000624804 202 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 MIR4679-1-201ENST00000637619 75 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA4P43681 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.17□□□□□ -1.58
CHRNA4P43681 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA4P43681 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CHRNA4P43681 AP000560.1-201ENST00000624150 1937 ntBASIC5.17□□□□□ -1.58
CHRNA4P43681 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA4P43681 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CHRNA4P43681 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA4P43681 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA4P43681 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA4P43681 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA4P43681 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA4P43681 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CHRNA4P43681 Y_RNA.233-201ENST00000364407 101 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA4P43681 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.16□□□□□ -1.58
CHRNA4P43681 Y_RNA.458-201ENST00000384240 102 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CHRNA4P43681 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CHRNA4P43681 Y_RNA.581-201ENST00000391017 97 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 MIR1178-201ENST00000408396 91 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 Y_RNA.597-201ENST00000410463 100 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 RNU6-1135P-201ENST00000411083 103 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 AL355433.1-201ENST00000422804 300 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA4P43681 ELOCP18-201ENST00000434209 337 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 CBX1P4-201ENST00000439415 457 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA4P43681 PRDX3P3-201ENST00000447765 522 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 BX284632.1-201ENST00000478218 541 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 AL139099.1-201ENST00000497398 403 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 RPL23AP55-201ENST00000498163 452 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CHRNA4P43681 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.16□□□□□ -1.58
CHRNA4P43681 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.16□□□□□ -1.58
CHRNA4P43681 AC063949.1-201ENST00000552900 865 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 AC007619.2-201ENST00000605743 379 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 HSPE1P14-201ENST00000605812 302 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 AC091895.1-201ENST00000624494 256 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.16□□□□□ -1.58
CHRNA4P43681 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
CHRNA4P43681 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHRNA4P43681 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
CHRNA4P43681 AC093849.1-201ENST00000563631 2209 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA4P43681 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.16□□□□□ -1.58
CHRNA4P43681 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.16□□□□□ -1.58
CHRNA4P43681 AC009643.2-201ENST00000603543 1448 ntBASIC5.15□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms