Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 U3.15-201ENST00000365398 212 ntBASIC1.43□□□□□ -2.18
HTTP42858 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.43□□□□□ -2.18
HTTP42858 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.43□□□□□ -2.18
HTTP42858 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.43□□□□□ -2.18
HTTP42858 AC098657.3-201ENST00000620434 263 ntBASIC1.43□□□□□ -2.18
HTTP42858 AC007342.9-201ENST00000623877 1385 ntBASIC1.43□□□□□ -2.18
HTTP42858 TEX21P-201ENST00000447107 1476 ntBASIC1.43□□□□□ -2.18
HTTP42858 RNA5SP489-201ENST00000410986 109 ntBASIC1.43□□□□□ -2.18
HTTP42858 CYCSP33-201ENST00000414485 327 ntBASIC1.43□□□□□ -2.18
HTTP42858 EBAG9P1-201ENST00000418955 543 ntBASIC1.43□□□□□ -2.18
HTTP42858 AL445305.1-201ENST00000432577 575 ntBASIC1.43□□□□□ -2.18
HTTP42858 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.43□□□□□ -2.18
HTTP42858 RNU6-113P-201ENST00000516653 101 ntBASIC1.43□□□□□ -2.18
HTTP42858 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.43□□□□□ -2.18
HTTP42858 AL159169.2-201ENST00000610061 1269 ntBASIC1.43□□□□□ -2.18
HTTP42858 AC007256.1-201ENST00000392253 2765 ntBASIC1.43□□□□□ -2.18
HTTP42858 SETP10-201ENST00000424368 814 ntBASIC1.42□□□□□ -2.18
HTTP42858 AC007560.1-201ENST00000426912 237 ntBASIC1.42□□□□□ -2.18
HTTP42858 EZH2P1-201ENST00000431167 291 ntBASIC1.42□□□□□ -2.18
HTTP42858 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.42□□□□□ -2.18
HTTP42858 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
HTTP42858 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.42□□□□□ -2.18
HTTP42858 AC010487.4-201ENST00000637027 61 ntBASIC1.42□□□□□ -2.18
HTTP42858 AL359851.1-201ENST00000569460 4997 ntBASIC1.42□□□□□ -2.18
HTTP42858 MTND4P1-201ENST00000457501 1466 ntBASIC1.42□□□□□ -2.18
HTTP42858 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.42□□□□□ -2.18
HTTP42858 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.42□□□□□ -2.18
HTTP42858 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.42□□□□□ -2.18
HTTP42858 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.42□□□□□ -2.18
HTTP42858 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
HTTP42858 MTND5P4-201ENST00000514978 288 ntBASIC1.42□□□□□ -2.18
HTTP42858 AC092451.2-201ENST00000538746 658 ntBASIC1.42□□□□□ -2.18
HTTP42858 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.42□□□□□ -2.18
HTTP42858 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HTTP42858 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HTTP42858 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
HTTP42858 RPL26P37-201ENST00000411983 438 ntBASIC1.42□□□□□ -2.18
HTTP42858 RNU6-1132P-201ENST00000459214 107 ntBASIC1.42□□□□□ -2.18
HTTP42858 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.42□□□□□ -2.18
HTTP42858 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HTTP42858 HMGN1P14-201ENST00000412459 517 ntBASIC1.41□□□□□ -2.18
HTTP42858 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.41□□□□□ -2.18
HTTP42858 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.41□□□□□ -2.18
HTTP42858 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.41□□□□□ -2.18
HTTP42858 PDCD5P1-201ENST00000543528 309 ntBASIC1.41□□□□□ -2.18
HTTP42858 AC007229.1-201ENST00000590455 412 ntBASIC1.41□□□□□ -2.18
HTTP42858 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.41□□□□□ -2.18
HTTP42858 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
HTTP42858 AL445213.1-201ENST00000412589 747 ntBASIC1.41□□□□□ -2.18
HTTP42858 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.41□□□□□ -2.18
HTTP42858 RPS15AP1-201ENST00000457423 391 ntBASIC1.41□□□□□ -2.18
HTTP42858 SNRPFP3-201ENST00000457792 225 ntBASIC1.41□□□□□ -2.18
HTTP42858 CBX3P8-201ENST00000532412 525 ntBASIC1.41□□□□□ -2.18
HTTP42858 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
HTTP42858 FABP5P3-201ENST00000437960 408 ntBASIC1.4□□□□□ -2.18
HTTP42858 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.4□□□□□ -2.18
HTTP42858 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.4□□□□□ -2.18
HTTP42858 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.4□□□□□ -2.18
HTTP42858 NPM1P52-201ENST00000518264 846 ntBASIC1.4□□□□□ -2.18
HTTP42858 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HTTP42858 MIR758-201ENST00000390227 88 ntBASIC1.4□□□□□ -2.19
HTTP42858 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.4□□□□□ -2.19
HTTP42858 AC104986.1-201ENST00000517978 436 ntBASIC1.4□□□□□ -2.19
HTTP42858 AC036111.3-201ENST00000526389 112 ntBASIC1.4□□□□□ -2.19
HTTP42858 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.4□□□□□ -2.19
HTTP42858 SNORA50A-202ENST00000629536 136 ntBASIC1.4□□□□□ -2.19
HTTP42858 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HTTP42858 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.4□□□□□ -2.19
HTTP42858 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.4□□□□□ -2.19
HTTP42858 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HTTP42858 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
HTTP42858 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
HTTP42858 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.39□□□□□ -2.19
HTTP42858 ARL5AP3-201ENST00000439327 386 ntBASIC1.39□□□□□ -2.19
HTTP42858 AL691517.1-201ENST00000440833 1235 ntBASIC1.39□□□□□ -2.19
HTTP42858 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.39□□□□□ -2.19
HTTP42858 SNORA31.15-201ENST00000516771 132 ntBASIC1.39□□□□□ -2.19
HTTP42858 AC104115.2-201ENST00000523026 687 ntBASIC1.39□□□□□ -2.19
HTTP42858 AC241377.1-201ENST00000619797 406 ntBASIC1.39□□□□□ -2.19
HTTP42858 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
HTTP42858 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.39□□□□□ -2.19
HTTP42858 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.39□□□□□ -2.19
HTTP42858 RPS23P4-201ENST00000487908 423 ntBASIC1.39□□□□□ -2.19
HTTP42858 AC096571.1-202ENST00000506634 735 ntBASIC1.39□□□□□ -2.19
HTTP42858 AC090525.3-201ENST00000605601 189 ntBASIC1.39□□□□□ -2.19
HTTP42858 AL445493.3-201ENST00000619568 477 ntBASIC1.39□□□□□ -2.19
HTTP42858 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.39□□□□□ -2.19
HTTP42858 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
HTTP42858 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
HTTP42858 RNU1-148P-201ENST00000384472 162 ntBASIC1.38□□□□□ -2.19
HTTP42858 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.38□□□□□ -2.19
HTTP42858 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.38□□□□□ -2.19
HTTP42858 AC009961.3-201ENST00000449832 765 ntBASIC1.38□□□□□ -2.19
HTTP42858 AC023790.1-201ENST00000482174 347 ntBASIC1.38□□□□□ -2.19
HTTP42858 Y_RNA.675-201ENST00000516389 149 ntBASIC1.38□□□□□ -2.19
HTTP42858 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HTTP42858 AC008427.1-201ENST00000503102 655 ntBASIC1.38□□□□□ -2.19
HTTP42858 KATNBL1P4-201ENST00000503545 918 ntBASIC1.38□□□□□ -2.19
HTTP42858 NDUFB4P9-201ENST00000511646 388 ntBASIC1.38□□□□□ -2.19
HTTP42858 AC013553.2-201ENST00000604244 589 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms