Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.25□□□□□ -2.05
CLIP1P30622 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.25□□□□□ -2.05
CLIP1P30622 AL356118.1-201ENST00000635272 1078 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.24□□□□□ -2.05
CLIP1P30622 AC011477.1-204ENST00000623416 1325 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 U8.1-201ENST00000362843 134 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 RNU6-53P-201ENST00000365367 106 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 AL590084.1-201ENST00000407885 387 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.24□□□□□ -2.05
CLIP1P30622 AC004223.1-201ENST00000479840 271 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 MTCYBP18-201ENST00000501056 747 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 AC008427.1-201ENST00000503102 655 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.24□□□□□ -2.05
CLIP1P30622 Y_RNA.675-201ENST00000516389 149 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 AC068714.1-201ENST00000559623 800 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 ZNF734P-201ENST00000419494 1534 ntBASIC2.24□□□□□ -2.05
CLIP1P30622 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CLIP1P30622 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CLIP1P30622 MTND5P35-201ENST00000557537 1720 ntBASIC2.23□□□□□ -2.05
CLIP1P30622 AL596028.1-201ENST00000326971 197 ntBASIC2.23□□□□□ -2.05
CLIP1P30622 RNU6-707P-201ENST00000364647 95 ntBASIC2.23□□□□□ -2.05
CLIP1P30622 PGBD4P3-201ENST00000440731 581 ntBASIC2.23□□□□□ -2.05
CLIP1P30622 RPL5P13-201ENST00000462840 709 ntBASIC2.23□□□□□ -2.05
CLIP1P30622 BZW1P2-201ENST00000473537 826 ntBASIC2.23□□□□□ -2.05
CLIP1P30622 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.23□□□□□ -2.05
CLIP1P30622 AP004607.1-201ENST00000524456 203 ntBASIC2.23□□□□□ -2.05
CLIP1P30622 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.23□□□□□ -2.05
CLIP1P30622 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.23□□□□□ -2.05
CLIP1P30622 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.23□□□□□ -2.05
CLIP1P30622 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.22□□□□□ -2.05
CLIP1P30622 MTND5P10-201ENST00000603719 1809 ntBASIC2.22□□□□□ -2.05
CLIP1P30622 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLIP1P30622 RNU4-51P-201ENST00000364206 140 ntBASIC2.22□□□□□ -2.05
CLIP1P30622 COX6CP12-201ENST00000446748 202 ntBASIC2.22□□□□□ -2.05
CLIP1P30622 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.22□□□□□ -2.05
CLIP1P30622 RPS23P3-201ENST00000470993 430 ntBASIC2.22□□□□□ -2.05
CLIP1P30622 MIR3660-201ENST00000584845 100 ntBASIC2.22□□□□□ -2.05
CLIP1P30622 AC006023.2-201ENST00000609916 167 ntBASIC2.22□□□□□ -2.05
CLIP1P30622 AC106730.3-201ENST00000624568 641 ntBASIC2.22□□□□□ -2.05
CLIP1P30622 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.22□□□□□ -2.05
CLIP1P30622 AL136380.1-201ENST00000447970 162 ntBASIC2.21□□□□□ -2.06
CLIP1P30622 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.21□□□□□ -2.06
CLIP1P30622 RNA5SP61-201ENST00000516453 100 ntBASIC2.21□□□□□ -2.06
CLIP1P30622 RNA5SP102-201ENST00000516865 106 ntBASIC2.21□□□□□ -2.06
CLIP1P30622 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.21□□□□□ -2.06
CLIP1P30622 DNAJC8P1-201ENST00000554535 372 ntBASIC2.21□□□□□ -2.06
CLIP1P30622 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.21□□□□□ -2.06
CLIP1P30622 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.21□□□□□ -2.06
CLIP1P30622 AC105429.2-201ENST00000610567 517 ntBASIC2.21□□□□□ -2.06
CLIP1P30622 uc_338.12-201ENST00000616344 181 ntBASIC2.21□□□□□ -2.06
CLIP1P30622 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CLIP1P30622 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CLIP1P30622 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.21□□□□□ -2.06
CLIP1P30622 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CLIP1P30622 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLIP1P30622 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.2□□□□□ -2.06
CLIP1P30622 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
CLIP1P30622 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CLIP1P30622 U3.40-201ENST00000408706 208 ntBASIC2.2□□□□□ -2.06
CLIP1P30622 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP1P30622 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP1P30622 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.2□□□□□ -2.06
CLIP1P30622 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP1P30622 RNA5SP480-201ENST00000516840 109 ntBASIC2.2□□□□□ -2.06
CLIP1P30622 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.2□□□□□ -2.06
CLIP1P30622 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.2□□□□□ -2.06
CLIP1P30622 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.2□□□□□ -2.06
CLIP1P30622 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.2□□□□□ -2.06
CLIP1P30622 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.2□□□□□ -2.06
CLIP1P30622 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.2□□□□□ -2.06
CLIP1P30622 MIR607-201ENST00000385241 96 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 RPL31P52-201ENST00000407532 367 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 RPL26P37-201ENST00000411983 438 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.19□□□□□ -2.06
CLIP1P30622 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.19□□□□□ -2.06
CLIP1P30622 AL121871.1-201ENST00000443413 436 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 AC244505.5-201ENST00000443639 207 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.19□□□□□ -2.06
CLIP1P30622 Z99714.1-201ENST00000450463 807 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.19□□□□□ -2.06
CLIP1P30622 RNU6-347P-201ENST00000516658 105 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 OR5AQ1P-201ENST00000527596 927 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 U73479.1-201ENST00000618062 168 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.19□□□□□ -2.06
CLIP1P30622 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.19□□□□□ -2.06
CLIP1P30622 AC080100.1-201ENST00000624239 5356 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 AC138915.1-201ENST00000565427 1685 ntBASIC2.19□□□□□ -2.06
CLIP1P30622 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.18□□□□□ -2.06
CLIP1P30622 Z75741.2-201ENST00000417272 1167 ntBASIC2.18□□□□□ -2.06
CLIP1P30622 RPS26P56-201ENST00000444468 240 ntBASIC2.18□□□□□ -2.06
CLIP1P30622 RBM43P1-201ENST00000476891 1081 ntBASIC2.18□□□□□ -2.06
CLIP1P30622 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLIP1P30622 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.18□□□□□ -2.06
CLIP1P30622 LLPHP1-201ENST00000603571 367 ntBASIC2.18□□□□□ -2.06
CLIP1P30622 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CLIP1P30622 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLIP1P30622 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.17□□□□□ -2.06
CLIP1P30622 AC009238.1-201ENST00000442165 424 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 AC009237.6-201ENST00000446969 424 ntBASIC2.17□□□□□ -2.06
CLIP1P30622 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms