Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC004944.1-201ENST00000517807 3059 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DMBP28068 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DMBP28068 SNORA68.1-201ENST00000364537 132 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 SNORA41-201ENST00000384675 132 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 MIR518C-201ENST00000384822 101 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 MIR135A2-201ENST00000384854 100 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 MIR524-201ENST00000385242 87 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 RNA5SP354-201ENST00000391247 136 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC016769.3-201ENST00000396562 315 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AL355615.1-201ENST00000406187 641 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 MIR1290-201ENST00000408735 78 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 RNU2-15P-201ENST00000410692 191 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 VN1R51P-201ENST00000411675 945 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 MTND1P23-201ENST00000416931 372 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 RPL7L1P10-201ENST00000427790 463 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AL035407.1-201ENST00000429211 571 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC024082.2-201ENST00000434771 238 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 RPL32P28-201ENST00000443577 397 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC104389.3-201ENST00000445629 235 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 GTF2IP12-201ENST00000456547 356 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 RNU7-23P-201ENST00000459465 62 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AL049714.1-201ENST00000466686 347 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 MRPL42P6-201ENST00000486397 371 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC109471.1-201ENST00000511631 612 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC008413.1-201ENST00000511864 177 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 GLYCAM1-201ENST00000546596 285 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC027807.1-201ENST00000559921 996 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC002487.1-201ENST00000604565 994 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC004852.3-201ENST00000614131 326 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
HLA-DMBP28068 UCA1.1-201ENST00000620952 75 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC025034.2-201ENST00000623264 286 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AC106730.3-201ENST00000624568 641 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 AL160394.1-201ENST00000624765 724 ntBASIC1.81□□□□□ -2.12
HLA-DMBP28068 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DMBP28068 DBF4P1-201ENST00000412976 1892 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DMBP28068 RPL21P132-201ENST00000331267 462 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 RNU6-582P-201ENST00000362989 107 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DMBP28068 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 OR5H15-201ENST00000383696 930 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 MTCO2P31-201ENST00000402702 684 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 U3.37-201ENST00000408528 213 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC241584.1-201ENST00000438469 1241 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 MTCYBP3-201ENST00000445588 1137 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC233279.1-201ENST00000455300 423 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 RPL32P14-201ENST00000463196 378 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 LINC00888-204ENST00000487386 421 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC026436.1-201ENST00000510537 270 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC113155.1-201ENST00000511141 769 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 RNU6-928P-201ENST00000516876 104 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AP003467.2-201ENST00000520175 319 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AP000916.1-201ENST00000533869 835 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AP002770.2-201ENST00000543613 532 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC078814.3-201ENST00000553036 491 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC027176.1-201ENST00000560204 514 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC090132.2-201ENST00000615881 347 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 MIR203B-201ENST00000636080 86 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HLA-DMBP28068 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HLA-DMBP28068 AC005336.3-201ENST00000623833 2679 ntBASIC1.8□□□□□ -2.12
HLA-DMBP28068 AL137003.2-201ENST00000606924 2538 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DMBP28068 RNU6-1035P-201ENST00000384477 107 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 RNU6-1072P-201ENST00000384703 107 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 RNU6-443P-201ENST00000384780 107 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 U3.20-201ENST00000390909 217 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC008173.1-201ENST00000418901 264 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.79□□□□□ -2.12
HLA-DMBP28068 TAAR7P-201ENST00000436141 242 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 UBE2V1P13-201ENST00000436983 439 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AL121871.1-201ENST00000443413 436 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 RPL7P36-201ENST00000444633 681 ntBASIC1.79□□□□□ -2.12
HLA-DMBP28068 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms