Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 CR383656.7-201ENST00000548164 174 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 AC136624.4-201ENST00000573044 370 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 SNORA74C-1-201ENST00000580726 201 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 SNORD58B-201ENST00000607313 66 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 AL021879.1-201ENST00000611756 288 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 AC007998.5-201ENST00000622938 237 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD8P13378 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXD8P13378 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXD8P13378 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXD8P13378 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
HOXD8P13378 AC006484.1-201ENST00000435086 1884 ntBASIC5.34□□□□□ -1.55
HOXD8P13378 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.34□□□□□ -1.56
HOXD8P13378 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXD8P13378 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.34□□□□□ -1.56
HOXD8P13378 AC000374.1-201ENST00000434698 1745 ntBASIC5.34□□□□□ -1.56
HOXD8P13378 SOCS5P3-201ENST00000425115 1576 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD8P13378 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD8P13378 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD8P13378 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD8P13378 RNU6-266P-201ENST00000364225 107 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 Y_RNA.515-201ENST00000384535 112 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AL445189.1-201ENST00000405722 338 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 MIR1302-6-201ENST00000408466 90 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXD8P13378 AC243428.1-201ENST00000421099 264 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD8P13378 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD8P13378 AC112492.4-201ENST00000456549 352 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 CYCSP34-201ENST00000458172 304 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AC084198.1-201ENST00000477747 402 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AC108860.1-201ENST00000484521 383 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXD8P13378 RNU6-408P-201ENST00000515910 100 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 Y_RNA.689-201ENST00000516589 107 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AC103783.1-201ENST00000520506 373 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
HOXD8P13378 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.33□□□□□ -1.56
HOXD8P13378 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.33□□□□□ -1.56
HOXD8P13378 AC109446.1-201ENST00000566172 220 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 Z98751.3-201ENST00000604447 521 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 TUG1_2.1-201ENST00000614234 87 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 AL138825.1-201ENST00000618587 192 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 MIR6758-201ENST00000620653 63 ntBASIC5.33□□□□□ -1.56
HOXD8P13378 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD8P13378 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HOXD8P13378 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD8P13378 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD8P13378 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXD8P13378 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD8P13378 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
HOXD8P13378 MTND5P7-201ENST00000413558 1798 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 OR56B2P-202ENST00000641377 2453 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
HOXD8P13378 AC063976.2-201ENST00000425667 3556 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 Y_RNA.350-201ENST00000365409 98 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 MIR548I3-201ENST00000408378 149 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 MIR548I1-201ENST00000408810 149 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD8P13378 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.32□□□□□ -1.56
HOXD8P13378 PSMA2P3-201ENST00000429685 675 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 RPL10P17-201ENST00000453852 316 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD8P13378 AC105758.1-201ENST00000506038 399 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD8P13378 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.32□□□□□ -1.56
HOXD8P13378 AC091516.1-201ENST00000549191 703 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC5.32□□□□□ -1.56
HOXD8P13378 MIR4660-201ENST00000583549 74 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 MTND4LP5-201ENST00000605152 292 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 AC103858.2-201ENST00000621471 543 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 U6.104-201ENST00000637979 90 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD8P13378 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HOXD8P13378 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HOXD8P13378 AC097461.1-201ENST00000568928 2821 ntBASIC5.32□□□□□ -1.56
HOXD8P13378 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.32□□□□□ -1.56
HOXD8P13378 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.32□□□□□ -1.56
HOXD8P13378 AC009643.2-201ENST00000603543 1448 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HOXD8P13378 AC092376.2-201ENST00000622621 4116 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HOXD8P13378 AC093775.1-201ENST00000624154 1868 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 Y_RNA.106-201ENST00000363189 100 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 SNORA41-201ENST00000384675 132 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 MIR1252-201ENST00000408861 65 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 RN7SKP27-201ENST00000410684 333 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 RNU6-603P-201ENST00000411403 107 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.31□□□□□ -1.56
HOXD8P13378 RPL31P2-201ENST00000413849 377 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.31□□□□□ -1.56
HOXD8P13378 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD8P13378 AC140479.3-201ENST00000418944 1126 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.31□□□□□ -1.56
HOXD8P13378 RPEP3-201ENST00000425462 676 ntBASIC5.31□□□□□ -1.56
HOXD8P13378 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms